Crotalus tigris (Tiger rattlesnake): 120318865
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Entry
120318865 CDS
T08476
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120318865 (CHD1)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120318865 (CHD1)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120318865 (CHD1)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
120318865 (CHD1)
SLIK complex
120318865 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
120318865
NCBI-ProteinID:
XP_039222917
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MNGHSDEESTRNTSGESSQSDDDSGSASGSGSGSSSGSSSNGSSSRSGSSDSDSGSESGS
QSESESDTSKEKKVQAKHPKVDGAEFWKSNPSILAVQRSAMLRKQQQQSKAASINSGSEE
ESSSSEDSGDDSSNEIKRKKHKDEDWQMSGSGSVSGTASDSDMEESRDKSSCEESESDYE
PKNKVKSRKPPSRIKQKSGKKTAVQKKRQLDSSSSSPSDDDDYDKRGSRRQATVNVSYKE
AEEAKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRVGRKGATGATTTIYAVEADGDPN
AGHDKSKESGDMQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLK
NASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE
DGALIAKKFQSRIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPNYIGGHENLELRDY
QLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTS
WQREIETWAPQMNAVVYLGDITSRNVIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLG
GLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEK
FSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQ
YYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQNLI
RSSGKLILLDKLLIRLRERGSRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRK
QALDHFNAEASEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK
KQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFNKEE
LSAILKFGAEELFKEPEGEEQEPQEMDIDEILNRAETRENETGPLSVGDELLSQFKVANF
SNMDEDDIELEPEQNSRNWEEIIPEVQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNG
NEGRRCRNRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGP
LERLDAIARDAELVDKSEIDLRRLGELVHNGCFKALKDNSSGQERAGGRLGKVKGPTFRI
SGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYTIPCHTKAAHFDMDWGREDDSNLLIG
IYEYGYGSWEMIKMDPDLNLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDIARKEAQR
LSGIGGSKRRKIRMKKSKTIKAIKMKEELKSDTSPPPSDKSDEEEEDSKDEMVSLKNPSK
IKMEKENEENLDADIALKKQADEKRETKENKKELKREKKEKEDKKEMKEKDMKEKRESKG
KEYTHKEKEVKEEKTNDYKSDSKDKIKKTPSADTPVHITASSEPVPISEDSEELDQKTFS
ICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWR
KNLWIFVSKFTEFDARKLHKLYKHAIKKRQETQQYNEQNINSCVNTNLIRNPDVERLKEN
TNHDDSSRDSYSSDRYLSQYHDHHKDRLHGDSYKKSDSRKRPYSTFSNGKDHRDWDHYKQ
DNRYYSDSKHRKLDDHRNRDHRLNLEGGFKDSRSHLDHRIHLDHRSSSDYSHHKSSRDYR
YHSDWQMDHRASSSGPRSPLDQRSPYDSRSPLGHRSPFDHSTDHKSTPEHMWSNRKT
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagcacaaggaacactagtggagaatcaagccaatca
gatgatgattctggatcagcatctggatctggatctggttcaagttctggaagcagcagc
aatggaagtagtagccgatcaggaagcagtgattcagattctggttcagagtctggcagt
caatcagaatcagagtctgacacatccaaggaaaagaaagttcaagctaaacatccaaag
gttgatggagctgagttttggaaatcaaatccaagcattcttgctgtacagaggtctgca
atgctcaggaaacagcaacagcagtcaaaagcagcatccataaatagtggatcagaagag
gaatcatcaagtagtgaggattctggagatgactcatccaatgaaatcaagaggaagaaa
cataaagatgaagattggcaaatgtctggatcaggatctgtttcgggaacagcttcagat
tctgatatggaagaaagcagagataaaagtagttgtgaagagagtgaatctgattatgaa
ccaaaaaataaagtcaaaagcaggaagcctccaagtagaataaaacaaaaaagtggaaag
aaaactgcagtgcagaaaaaaagacaacttgactcgtcatcatcatcaccatcagatgat
gatgattatgataaaagaggttctcgccgccaggcaacagtaaatgttagttataaagaa
gctgaagaagcaaagacagattcagatgatctcctggaagtctgtggagaagatgttcca
cagcctgaagaagatgaatttgaaacaattgaaaaatttatggatagtcgcgttggacga
aaaggagcaactggtgctacaaccactatctatgcagttgaagctgatggagatccaaat
gcaggacatgataaatcaaaagaatctggtgatatgcagtatttgattaaatggaaaggt
tggtcccatattcataatacctgggaaactgaagaaactctaaagcagcagaatgttaga
ggaatgaagaaactggacaactataagaaaaaggatcaggaaactaagcgttggctgaaa
aatgcttctccagaagatgtagaatattacaactgtcagcaagagcttactgatgacttg
cataagcagtatcaaattgtagagagaattattgcccattctaatcagaagtcagcagca
ggctatccagattattattgtaaatggcaaggtctcccttactcagagtgcagctgggaa
gatggagctctcattgcaaaaaagttccagtcacgcattgatgagtattttagtagaaat
cagtcaaagactactccatttaaagattgtaaggttttgaagcaaagaccaagatttgta
gctttaaagaaacaacctaattacattggaggtcatgaaaacttagagttaagagattat
caattaaatggactaaattggttagcccattcatggtgcaagggaaatagctgtattctt
gctgatgaaatgggtttgggcaaaacgatacaaaccatctcctttttgaattacttattt
catgaacatcagttgtatggacccttcttgctggtagtacctctttccaccctgacatct
tggcaaagagaaatcgagacatgggctccccagatgaatgctgtagtttatttgggagat
attaccagtagaaatgtgataagaacacatgaatggatgcatccacagaccaaacgatta
aagtttaatatcttattgacaacttatgaaattctactgaaagataagtcattccttgga
ggcttaaattgggcctttataggagtagatgaagcccatcgattaaaaaatgatgactcc
ctcttatataagacattaatagacttcaaatctaatcatcgccttcttatcactggaaca
cctctacaaaactccctgaaagagctgtggtccctgcttcatttcatcatgccagaaaaa
ttctcttcttgggaagattttgaagaagaacatgggaaaggaagggaatttggttatgca
agtcttcacaaagaacttgaaccatttctgttgaggagagttaagaaagatgtagaaaaa
tctctacctgccaaggttgaacaaattttaagaatggaaatgagtgcattgcaaaagcag
tattacaagtggattttaacaaggaattacaaagccctaagtaagggatcaaaaggcagc
acttcaggctttctgaatatcatgatggaactcaaaaagtgttgtaatcattgctacctc
attaagccaccagatgataatgaattctataataaacaggaggccttacagaacttaatc
cggagtagcgggaagctaattcttttagacaagctgctgattcgcttacgagagcgtggc
agtagagtacttatattctctcagatggtgcggatgctggacatcttagctgaatatttg
aaatatcgtcagtttccctttcaaagactagatgggtcaataaaaggagaactgagaaaa
caagcactggatcattttaatgcagaagcctctgaggatttttgctttttactgtctaca
agagctggaggtctaggtataaacttagcatctgctgatactgttgttatatttgattct
gactggaaccctcaaaatgatctgcaagctcaggctagagcacacagaattggacaaaaa
aaacaggttaacatttatcgtttagtgaccaaaggatcagtggaagaagacattttggag
agagccaagaagaaaatggttttagatcatctagttattcagagaatggacactacagga
aaaactgtattacatacaggctctgcaccctctagctctgctccttttaacaaagaggaa
ctgtcagctattctaaagtttggtgctgaggaacttttcaaagaaccagaaggggaagaa
caggaaccacaggaaatggacatagatgaaatattgaatagagctgaaacacgggaaaat
gaaactggaccattaagtgtgggagatgaattgctttctcagtttaaggtggccaatttt
tccaatatggatgaagatgacattgaattggagcctgaacaaaattcaagaaactgggaa
gaaataattccagaggtccagagacggagattagaagaagaagaaagacaaaaggaattg
gaagaaatttatatgcttccaagaatgagaaactgtgcaaaacaaataagttttaatgga
aatgaaggaagacgttgtaggaatagaagatattctggatcagatagtgactctgtctca
gaaagaaaacgaccaaaaaaacgtggaagaccacggaccattccccgggaaaacattaaa
ggatttagtgatgcagagattcggaggtttatcaaaagttacaagaaatttggggggcct
cttgaaagattagatgccatagctagagatgctgaattagtggataaatctgagatagat
ctccggcggcttggagagcttgtacataatggatgcttcaaagctttgaaagacaactca
tctggacaagaaagagcaggaggtaggcttggaaaagttaaaggcccaacattccgaata
tcaggggtacaagtaaatgcaaaattggtcatctcacatgaagaagagctggcaccatta
cataaatccattccttcagatccagaggaaaggaagagatacaccattccttgtcacact
aaggctgctcattttgatatggattggggtagggaggatgattccaaccttctaataggc
atttatgagtatggatatggtagctgggaaatgataaaaatggacccagatctcaacttg
acacacaagattctgccagatgatccagataagaaaccccaagccaagcaattgcagacc
cgtgcagactacctcataaaattattaaataaggacatcgcaagaaaagaagcacaaaga
ctttctggaataggaggttcaaagagaagaaagataagaatgaaaaaaagcaagaccata
aaagcaataaaaatgaaagaggagttaaagagtgacacatcaccaccaccttcagataag
tctgatgaagaggaagaagatagcaaggatgaaatggtttcattgaaaaatccaagtaag
ataaaaatggaaaaagaaaatgaagaaaatcttgatgcagatattgctttgaaaaagcag
gctgatgaaaaaagagaaactaaggaaaataaaaaggaactaaaaagggagaaaaaagaa
aaggaggacaagaaggagatgaaagaaaaagatatgaaagaaaagagggaaagcaaagga
aaggaatatacccacaaagaaaaagaagttaaagaagaaaagacaaatgattataaatct
gacagcaaagacaaaataaagaaaactccttcagcagacacacctgttcatataacagca
agcagtgaaccggttcctatatcagaagattcagaagagttggatcagaaaaccttcagt
atatgcaaagaaagaatgaggcctgtcaaagcagcattgaaacaactggataggccagag
aaaggtctttcagaaagggaacaactagaacatactagacagtgtctcataaaaattgga
gaccatataacagagtgtctaaaagaatacacaaatcctgaacaaattaaacagtggaga
aagaatttgtggatttttgtttccaaatttactgaatttgatgccagaaaactacacaaa
ttgtacaaacatgcaattaaaaagcgccaggaaacacagcagtataatgaacagaatatc
aatagctgtgtgaacacaaatttgattagaaatccagatgtggaacggttaaaagagaac
acaaatcatgatgacagtagtagggacagttattcctctgatagatacttatcacagtat
catgatcatcacaaagacagacttcatggagattcttacaaaaaaagtgattcaagaaaa
aggccttattccactttcagcaatggaaaagatcatagagattgggatcactataaacag
gataatagatactacagtgatagtaaacatagaaagttagatgatcacagaaatagagat
cacagattgaatctggaaggaggatttaaagacagccgatcacatttagatcaccggata
cacttagatcatcgatccagttcagactacagtcatcataaatcttcaagagattatagg
tatcactcagactggcaaatggaccacagagcttccagtagtgggcccaggtcaccatta
gatcaacggtcaccttatgattctcgatctcctttaggacatagatctccttttgaccat
tcaacagatcacaaaagtacaccagaacatatgtggagtaatcggaaaacatag
DBGET
integrated database retrieval system
