Crotalus tigris (Tiger rattlesnake): 120318954
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Entry
120318954 CDS
T08476
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig00310
Lysine degradation
ctig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120318954 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120318954 (PRDM2)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120318954 (PRDM2)
Enzymes [BR:
ctig01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
120318954 (PRDM2)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120318954 (PRDM2)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120318954 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-H2C2_2
zf-C2H2_ZNF462_1st
zf-C2H2_11
zf-C2HE
EVE
Motif
Other DBs
NCBI-GeneID:
120318954
NCBI-ProteinID:
XP_039223089
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
MNQNSTGPSGSVETLADVPEHILKGLPEEVRLLPSTVDKTRLGVWAAKPIFRGRKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPAKGNWLRYVNWARSGKEQNLFPLEINR
TIYYKTLKPIEPGDELLVWYNGEENPEIAAALEEERASHRSKRHSPKAKKAKKKSQEAKN
KGKKARDRKRKPPLEGPDMRETEEGQKLEDEAPTVSAVLPLDQAAVIQEMVNQDVLPSLL
ISSVACEPPARPEDKAEVLLGGAEGSEEDPEQQQEEEEEEEEEEPMEEEDEEEPQEGEEE
EEEEEEEEEESLAKENPEVESGWGCGDRLESVEEQSSLSEDSAGSSPKKKALGKAPKARG
EPSTQEAPMFPCQHCERKFTTKQGLERHVHIHISAISHAFKCRYCGKAFGTQINRRRHER
RHEAGPRRKLLLPLASTQLSGASTAAAEGGVQDEAKARQEAPTPEAERDTSKTPPPPLPL
EESKEPKELHPCQYCRKVFGTHTNMRRHQRRVHERHLIPKGVRRKPEEPQAPVGPAQQAP
STYLASTDLEEGEGEADDLMDVSSNISENLNYYIDGKIPSNSSTSNCEVIEVEPGAAEVY
GINCLLSPVTVDISPNVKAVPVHLVEESKEPPVGGTLEAKKRRTASPPLLAKVKTEMDPE
PITSLCSLTIPLAISTVESLPFPREKSVYLSSKLKQLLQTQDNNKVVPSPPLPVGEIPKL
ALPVASSPLLPATSSRFKRRTSSPQHSPGLREPGKAGKAKPAWNETALGAKAPKVERRSN
SPAWSLPGREEREALSPEEYKASREWAPSPPFGNVCNQQPLDLSSSVKQRSNGKSRAQAP
WESVLDLSVHKKPCSDGEGKEATPPAGGAIKKKPTTSMLQKVLLNEYNGTDLGPENPSPD
MSPRPNACKPAETPQPQPGPAPPAPGAELGCSGLTVTEVPLPPPSSCPEPSASPSHLPCP
PMLQAPTPPPTLLPTAPLPLLEDPGSTPPSSCPSPLSNATAHSPLPILSPTVSASPLHSV
EPLDCASPGPPTLSSSSSPSPSSSSSSSSSSSFSSASPSSPSPPPLSVVSSILSPGDQLE
NPGPLVTFKQEEGEAGGQRLREDPHPCSAAEAAQETFSKSFVCNVCQAPFLAIKDLARHL
SVHAGDWPFKCEFCIQLFREKAALSEHRFLLHGVGNIFACSVCKKEFAFLCNLQQHQRDL
HPDKECSHHQFESGTLRPQNFTDPSKASAEEMQSLPSTALQPSKEEEEEEEELNDSSEEL
YTTIKIMAAGVKPKDPDVRMGLNQHYPSFKPPPFQYHHRNPNGIGATATNFTTHNIPQTF
STAIRCTKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQAVRPKNGVVLPSPA
GSAFRRVGQPKKLDFSLEASRAASNKLKLSALKKKQQLVQRAILQKKKSQQQQQQRAELK
TGGPEPSTHICPFCGREFTYIGSLNKHASYSCPRKRHSSSKEKKKKAKTKVGGSSPGSSK
SSTNPRRRTADAEIKMQGAATQLGKTRTRSSGPTAAQMPSASFKLKQGAKFPKRGHPPAA
AVRVGKGAPPEGKRSKGAARSGGAPGLLGKASGKLHIRIQRGKAALTSQRKTAGRFSAKS
RERVGGPVTRSLQQQQAMSAEATESKREESAARPELKDTRSLL
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaactcaaccgggccttcaggatcagttgagactttggccgacgtccccgag
cacatcctcaaagggcttccggaggaagtgaggcttctcccgtccactgtggacaagacc
cggcttggtgtctgggccgcaaagcccattttcagaggcaggaagtttggccccttcgtt
ggtgacaagaagaaaaggtcccaagtgaaaagcaatgtgtacatgtgggaggtctattac
ccaaatttggggtggatgtgtgtggacgccacagaccctgcgaagggaaactggttgcgt
tatgtgaactgggctcgctcaggaaaggagcagaaccttttcccgctagaaatcaatcgg
accatttactacaaaacgttaaagccaattgagcccggggatgagctcctggtctggtac
aatggggaggagaacccggagatagcagctgccctggaggaagagagggccagccaccgc
agcaagaggcactcccccaaggccaagaaagcgaagaaaaaaagccaggaggccaagaac
aaaggaaagaaggccagggataggaagcggaagcctcctttggaaggtcccgacatgagg
gagactgaggaaggccagaagctggaggacgaagccccaacggtttcggcggtgttgccc
cttgaccaggccgccgtcatccaggagatggtgaatcaagacgtgcttcccagcctgctc
atctccagtgtggcctgcgagccgcccgccaggcctgaggacaaggcggaggtcctcctg
ggtggagcagaaggttcagaggaggatcctgagcagcagcaggaggaggaggaggaggag
gaggaggaggagcccatggaggaagaggatgaggaagagcctcaagagggggaggaggag
gaagaggaagaggaggaagaggaggaggagagcttagcaaaagaaaatccagaggtggaa
tccgggtggggctgtggggacaggctggagtctgtggaggagcagagcagcctctccgag
gactcggccggaagctcccccaagaaaaaagccctggggaaggctcccaaggccaggggg
gagcccagcacccaggaggcgcccatgttcccctgccagcattgcgaaaggaagttcacc
accaagcagggcctggagcgccacgtgcacatccacatctcggccatcagccacgccttc
aagtgccgctactgcggcaaggccttcggcacgcagatcaaccgccggcgccacgagcgg
cgccatgaggccgggcccagacggaagctgctcttgcccttggcctccacccagctgtct
ggggccagcaccgcggctgccgaggggggggtgcaggacgaagccaaggccaggcaggag
gcccccaccccagaggccgagagagacacttccaaaacgccaccccctccgctgcctttg
gaggagagcaaggagcccaaggaattgcacccatgccagtactgcaggaaggtcttcggc
acccacaccaacatgcgcaggcaccagcggagggtccacgagcggcacctcatccccaaa
ggggtcaggagaaaaccggaggagccccaggctcccgtgggcccggcccaacaggccccc
agcacgtacctggccagcacagacctggaggagggggagggggaggctgacgacctcatg
gacgtctccagtaacatctcggagaatctcaactactacatcgacggcaagatcccatcc
aacagcagcaccagcaactgtgaggtgatcgaggtggagcctggcgccgccgaagtctac
ggcatcaactgcctgctgagtcccgtcacggtagacatctcccccaatgtcaaggcagtg
ccggtgcacctggtggaggagtcgaaggagccccctgttggcgggacccttgaggccaaa
aagaggaggacggcgagccccccactgctggccaaggtaaagaccgaaatggatccggag
cccatcacctcgctgtgttccttgacgattcccctcgccatatcgaccgtggagagcctg
cccttccccagagagaaaagcgtgtatttatcctccaagctgaagcagcttcttcagaca
caggacaacaataaggtggtcccctccccaccattgccggtgggggagatcccaaagctg
gcactccccgtggcctcctcccctctgctcccggccacctcaagcaggttcaagcggcgc
accagttccccacagcacagtccgggccttcgagaacctggcaaagccggcaaagccaag
cctgcttggaatgagacggccctgggtgcgaaggctcccaaggtggagagacggagcaac
tcccccgcgtggagtctgcctgggagagaagaaagggaagcactgagtccagaagagtac
aaggcctccagggagtgggcgccgagccccccctttgggaatgtgtgcaaccagcagccc
ttggacctgtccagcagtgtgaagcagcggtcgaacgggaagagccgggcccaggcgccc
tgggaatccgtgctggacctcagcgtgcacaagaagccatgcagcgatggcgaaggcaag
gaggcgactccaccagcagggggcgccattaagaagaagcccaccacttccatgttgcag
aaggtcctgctcaatgaatacaatgggacggatttggggcccgaaaacccctccccggac
atgagccccaggccgaatgcctgcaagccagccgaaaccccacaaccgcagcctggcccg
gctcccccggcccctggggcagagttgggctgctctggcctcactgtcaccgaggtgcct
ttgccgccaccctcgtcctgcccagagccatcggcctctccctcccatcttccgtgccct
cccatgctccaggcccccacgcctccccctactctccttcccactgctcctttgcccctc
ctggaagaccctggtagcaccccaccaagctcctgcccctctcccctgtccaacgccaca
gctcactccccgctgcccattctttccccaaccgtctcggcctccccccttcattctgtg
gagccccttgactgcgcttcccccgggccacccactctatcttcgtcctcctccccctcc
ccctcttcctcctcctcctcctcctcttcctcctctttctcttccgcatccccgtcctct
ccttccccgcctcccctctcagtggtctcttccatcctctctcctggcgaccagctggag
aatccaggcccccttgtgactttcaagcaagaagagggagaggccgggggtcagaggctg
agggaggacccccacccctgtagcgcagcagaggccgcccaggaaaccttcagcaagagc
tttgtgtgcaacgtctgccaggcccccttcctcgctatcaaggaccttgcccggcatctg
tccgtccacgctggggactggcccttcaagtgcgaattctgcatccagctcttcagggag
aaggcagccttgtcagagcaccgcttcctgctccacggggtggggaacatcttcgcctgc
tccgtctgcaagaaggaatttgctttcctgtgcaacctccagcagcaccagcgagacctg
caccccgacaaagaatgcagccaccaccagttcgagagcgggactctgcgcccgcagaat
ttcaccgatcccagcaaagccagcgcagaggagatgcagagcctgcccagcactgccctg
cagccctccaaggaggaggaggaggaggaggaggagctaaacgactcctccgaagagctc
tacactaccatcaaaatcatggcggccggggtcaagccgaaggaccccgacgtccgcatg
ggcctcaaccagcactaccccagcttcaagccccccccattccagtaccatcaccggaac
cccaatggcataggagccacggccacaaatttcaccacccacaacatcccccagaccttc
tccaccgccatccgttgcaccaagtgcgggaagagcgtggacaacatgcccgaactgcac
aagcacatcttggcttgcgcatctgccagcgacaaaaagcggtacaccccaaaaaagaac
cccgtgcccctaaagcaggccgtgcgccctaaaaacggggtggtcttgcccagcccggct
ggcagcgccttccggcgcgtgggccagcccaagaagctcgacttcagcctggaggccagc
cgggcagcctccaacaagctgaagctcagtgccctgaagaagaagcagcagctggtccag
agggccattctgcagaagaagaagtcgcagcaacagcagcagcagcgggcggagctcaag
accggtggcccagagcccagcacccacatctgccccttctgtggccgggaattcacgtac
atcgggagcctgaacaagcacgcctcctacagttgcccccgcaagcgccattcctcctcc
aaggagaagaagaagaaggccaagacgaaagtggggggctcgtctcctggcagcagcaag
agcagcaccaacccccgtcggcgaacagccgacgccgagatcaagatgcagggcgctgct
actcagctgggcaagactcgcacccgcagctcggggcccacagctgcccagatgccctcc
gcctccttcaagctgaagcagggtgccaagttccccaaaaggggccaccctccggccgcg
gccgtgagagtgggcaagggggctccgccagaggggaagcggagcaagggcgccgccagg
agcgggggggcccccggactgctgggcaaagcctcaggcaagctgcacatccgcatccag
cgtgggaaggcagccctgaccagccagaggaagactgctggccggttcagtgccaagtcg
agggagagggtggggggccccgtcacccggagcctacagcagcagcaggcgatgtctgcg
gaggccacggagagcaagagggaggagagcgctgcccggccggagctgaaggacaccagg
agcctcctttga
DBGET
integrated database retrieval system
