Crotalus tigris (Tiger rattlesnake): 120319023
Help
Entry
120319023 CDS
T08476
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120319023 (CLSTN1)
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Cadherin related
120319023 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
EphA2_TM
PFF1_TM
Toxin_R_bind_N
V_ATPase_I
TMEM132_C
Zip
Motif
Other DBs
NCBI-GeneID:
120319023
NCBI-ProteinID:
XP_039223229
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MRLLAPACLLAALLCGGLRAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDSPL
RFAVFPEDLGLSFLPLESFELTLSKEGEICGFKIHGQNVPFEAVVVDKSTGEGMIRSKEK
LDCELQKEYTFTIQAYDCGTGPDRVNMKKSHKATVHIQVNDVNEYAPVFKEKSYKATAIE
GKRYDNILKVEAVDADCSPQFSQICSYEIVTPEVPFAISKDGYIKNTEKLSFSKEHQYKL
TVTAYDCGKKRAAEDVLVKISIKPTCKPGWQGWSKRMEYEPGTGALSLFPSIHLETCDEP
IVSVQATVELETNHIGKGCDRDTYSEKSLHRLCGASSDTAELLPSPSNAANWTVNLPTDN
GHESDQVFEFNGTQAVTVPESVVSISLKEPFVISVWMRHGPGAKEKETILCNSDKTDMSR
HRYSLYVHNCRLVFLFRQDPSEGQSYKPAEFHWRLNQVCDQEWHHYILNVEFPVATLYVD
GVSFDPFPVTEDYPLHASKIESQLVVGACWQEYTENENDTDKATENPAGGDQRMAQFFRG
NLAGLTIRSGKLESKKVIDCLYTCKEGLDLPTADGAAKGLKIHMNPSQSALSLEGDDIER
FDKTMQRISYVNSRQFPTPGIRQIKITSTVKCADKEACIAIPLVEGYVVVLQPEEPKISL
SGIDHFARSASEFESPEGVSLFPELRIVSTITREVEPEGEGEEDPTVQESLVSEEIMHNL
DTCEVSVLEEELNRDQESLEVDLVRLQQKGMEMSSSGLDLILTGVDTMASYEEVLHLIRY
RNWHTVSLFDRKFKLVCSELNGRYVSNEFKVEVNVIHTANVLEHASHIAAQQPQFVQPVH
HSFVDLSGHNLVNPHPGFSVVPSTATVVIVVCISFLVFMIILGVFRIRAAHQRTMRDQDS
GKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEESEDGAEEDDITSAESESSEEEEE
GGEQEDPQHANRQQQLEWDDSTLPY
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgctggccccggcctgcctcctggcggcgctgctctgcggcggccttcgcgcc
gcccgagttaacaagcacaagccatggattgaaaccacttaccatggcattgttaccgaa
aacgacaacacagtgctcctggaccctcccttgatagcactggataaagattcgccgctt
cgctttgcagtctttcctgaagacttgggtttatcttttctccctttagagagttttgag
ctgaccctcagcaaggaaggtgagatttgtggatttaaaattcacggccaaaatgtcccc
ttcgaagcggtggtggtggacaaatccaccggggaagggatgatccgatccaaagaaaaa
ctggactgcgaactgcagaaggaatacaccttcaccatccaggcctacgactgcgggaca
ggaccggaccgagtcaatatgaagaagtctcacaaagccaccgtgcacatccaggtgaac
gatgtcaacgagtacgcaccagtcttcaaggagaagtcctacaaggccacggcaatcgag
gggaagcggtacgacaacatcctgaaggtggaggcggtggatgccgactgttccccgcag
ttcagccagatctgcagttacgagattgtcactccggaggttccctttgcaatcagcaaa
gacggttacattaagaacacggagaagctaagcttcagcaaggagcaccagtacaagctc
accgtcacggcctacgactgcgggaagaagagggcggccgaggacgtgctggtgaagatc
agcattaaacccacctgcaaaccaggctggcagggctggagcaaaaggatggaatacgaa
cccgggacaggggcgctttccctcttccccagcatccacctggagacctgtgacgagccc
atcgtctcggtccaggccaccgtcgagctggagaccaatcacattgggaaaggctgcgac
cgagacacctactcggagaagtcccttcaccggctctgcggcgcgtcctcagacaccgcg
gagctgctcccttccccgagcaacgcggccaactggaccgtcaacctccccaccgacaac
ggccacgaaagcgaccaggttttcgagttcaacggcacccaagccgtgacggtgccggag
agcgtggtcagcatcagcctgaaggagccatttgtgatttccgtctggatgaggcacggc
cccggggctaaggagaaggagaccatcctctgcaattcggacaagacagacatgagccgt
caccgttattccctctacgtgcacaattgccggttggtcttcctcttccgccaggatccc
tccgaggggcagagttacaagccggccgaattccactggaggctgaatcaggtttgcgat
caggaatggcaccactacatcctcaacgtagagtttccggtggccacgctctacgtcgat
ggcgtttcctttgatcccttcccagtgactgaggattatccccttcacgcctccaagata
gaatcccagctagtggttggagcttgctggcaagagtatacggaaaatgagaatgacacg
gacaaagccacagaaaatcctgcagggggtgaccagcggatggctcagttcttccgcgga
aacctggctggcctgaccatccgctcgggcaagctggagagcaagaaagtcatcgattgc
ctgtacacctgcaaggaaggcctggacctgcccactgcggacggcgctgcgaagggcctc
aagatccacatgaatcccagccagtcagccctgagtttagaaggggacgacatcgaacgg
ttcgacaaaaccatgcagcgtatctcgtacgtgaactcgcgccagttccccacgcccggc
atccggcagatcaaaattacaagcacggtgaagtgtgccgacaaggaagcctgcatcgcc
attccgctcgtggagggctacgtcgtggtcctacagcccgaggagcccaagatcagcctg
agcggcatcgaccactttgcccgctcagcttcggagttcgagagccccgaaggcgtgtcc
ctcttccccgagctccggatcgtcagcaccatcacccgggaggtggagcccgagggagaa
ggagaggaggaccctacagtccaagaatccttggtgtccgaagaaatcatgcataatttg
gacacctgcgaagtctcggtgctagaggaggagctgaaccgggaccaagaaagcctggag
gtcgacctggtgaggctgcagcagaaaggaatggagatgagcagctccggccttgacctc
attcttaccggggtggacaccatggctagctacgaggaggttttgcacttgatccggtac
cgcaactggcacaccgtctcactctttgaccggaaattcaagctggtgtgctcggagctc
aacggacgctacgttagcaatgaatttaaggtggaagtgaacgtcatccacacagctaac
gtcctggaacacgccagccacattgctgcccagcagccccaatttgtgcagcctgtccat
cactcttttgttgacctctctggccataatctcgtaaaccctcacccggggttttccgtg
gttcccagcaccgccacagtggtgatcgtggtgtgcatcagcttcctggttttcatgatc
atcctgggggtcttccggatccgagcggcccaccagcggacaatgcgggaccaggactcc
gggaaggagaacgagatggactgggacgactctgccttgaccatcacggtgaaccccatg
gagacctacgaggaccagcacagcagcgaagaggaggaggaggaagaggaaagcgaagac
ggggccgaggaagacgacatcaccagcgccgaatcggagagcagcgaggaggaggaggag
gggggcgagcaggaggacccccagcacgccaaccggcagcagcaattggaatgggatgac
tcgaccctgccctactga
DBGET
integrated database retrieval system
