Crotalus tigris (Tiger rattlesnake): 120319034
Help
Entry
120319034 CDS
T08476
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
ctig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120319034
03015 mRNA surveillance pathway
120319034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120319034
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120319034
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120319034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120319034
NCBI-ProteinID:
XP_039223253
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MATDSWALAVDEQEAAATASLSNLHLKEENLKPDANGAVVKTRDSAEKTEEEEKEDRAAQ
SLLNKLIRSNLVDNTNQVEVLQRDPTSPLYSVKSFEELRLKSQLLQGVYAMGFNRPSKIQ
ENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPDHKHPQCLCLSPTYELALQTG
KVIEQMGRFYPELNLAYAVRGNKLERGQKIAEQIVIGTPGTVLDWCSKLKFIDPKKIRVF
VLDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKR
EEETLDTIKQYYVLCSSREEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSKESHQ
VALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPD
NETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIHKLDTDDLDEIEKIAN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgactcgtgggcgctggcggtggacgagcaggaggcggccgccacggcctcg
ctgagcaacttacacctgaaggaggagaacctcaagccagatgccaacggagccgttgtc
aagacaagggacagtgcagagaagacggaagaagaggaaaaagaggatcgggctgcccag
tccttgctgaacaagctgatccgtagcaatttggtggacaacacgaaccaggtggaggtg
ctgcagagggaccccacatcgcccctgtactcggtgaagtctttcgaagagctgcgcttg
aagtcccagctgctccagggggtctatgccatgggcttcaacaggccctccaagatccag
gagaacgccctacccatgatgctcgcggagcccccacagaacctgattgcccagtcccag
tccggcaccgggaagacggcagctttcgtcctggccatgcttagccgggtggagccggac
cacaagcatccccagtgcctctgcctttcccccacgtacgagttggccctccagaccggg
aaggtcatcgaacagatgggccggttctaccctgagctgaacctggcctacgccgtccgg
ggcaacaagctggagcgtggccagaagattgccgaacagatcgtcattggcacgccaggc
accgtcctggactggtgttcaaagctcaaattcatcgaccccaagaagatccgggtattt
gttctggacgaggccgacgtcatgatcgccacccaggggcaccaggaccagagcatccgc
atccagaggatgcttcctcgagattgccagatgctgctcttctcggccaccttcgaggac
tcggtgtggaagtttgcccagaaggtggttcccgaccccaacatcatcaagctgaagagg
gaggaggagacgctggacaccatcaagcagtactacgtcctctgcagcagccgggaggag
aagttccaggccctctgcaacatctacggggccatcaccatcgcccaggccatgatcttc
tgccacacccgcaagacggccggctggctggcgggggagctgtccaaagaaagccaccag
gttgccctcttgagtggggagatgatggtggagcagcgggcggccgtgatcgagcgcttc
agagagggcaaggagaaggtcctggtgaccaccaacgtttgcgcccgaggcatagacgtg
gagcaggtctctgtggtgataaactttgacctcccagtggacaaagacggcaacccagac
aacgagacctacctgcaccgcatcggccgcacggggcgctttggcaagcgggggctggcc
gttaacatggtggacagcaagcacagcatgaacatcctcaaccggatccaggaacatttc
aacaagaagattcataaattggatacagatgatttggatgagattgagaaaattgctaac
tga
DBGET
integrated database retrieval system
