Crotalus tigris (Tiger rattlesnake): 120319087
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Entry
120319087 CDS
T08476
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120319087 (YBX1)
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120319087 (YBX1)
03041 Spliceosome [BR:
ctig03041
]
120319087 (YBX1)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
120319087 (YBX1)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120319087 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
120319087 (YBX1)
Spliceosome [BR:
ctig03041
]
Common components
Common spliceosomal components
General mRNP proteins
120319087 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
120319087
NCBI-ProteinID:
XP_039223382
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MSSEAETQAPPSAATLAAPAAAPPAPAPLPTPTGPSPAVADAKPSNGGNSSGGGGGGNGT
NGGLGMAAPPAGGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPR
KYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNQYRRYPRRRGPPRN
YPQNYQNSESGEKNEGSENLQEGQSQQRRPYRRRRYPPYYMRRPYGRRPQYSNAPVQGDL
VEGADNQGAGEQGRPVRQNLYRGYRPRYRSLPGFFRGPPRQRQPREEGNEEDKENQADEV
QGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKAAEPSAENTSAPEAEQGGAE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccaggcgcccccctccgccgccactctggcggccccggcg
gccgccccgcctgcgccggccccgttgccgacgcccacgggcccctccccggccgtcgcg
gatgccaagcccagcaacggcggcaacagcagcggcggaggcggcggcggcaacggaacc
aacggcggcctgggcatggcggcgccccccgccggcggggacaagaaggtcatcgcaacg
aaggttttggggacagtgaaatggttcaacgtaaggaacggctatggcttcatcaacagg
aatgacaccaaggaagatgtgtttgtccaccagactgctatcaagaagaataaccccagg
aaataccttcgcagtgtaggagatggagaaactgtggagtttgacgtggttgaaggtgaa
aagggagcagaggcagccaatgttacaggtccgggcggcgttcctgtgcaaggcagcaaa
tacgcagcagaccgtaaccagtacagacgataccctcgtcgcagaggccctccgcgcaac
tacccacaaaattaccaaaacagtgaaagtggggaaaagaatgaggggtcagagaacttg
caggaagggcagtcccaacagcgccgcccctaccgcaggaggcggtaccccccttactac
atgcgtcggccctacggccggcggccacagtactccaatgcccctgtgcaaggagaccta
gtggagggtgccgacaaccagggtgcaggggagcaaggcaggcctgtcaggcagaacctg
tatcggggttacagaccgcgctatcgcagcctgcccgggtttttcaggggccctcctcgc
caacggcagcccagggaggaaggcaacgaagaagacaaagagaaccaagcagatgaggtc
cagggccagcagccacctcagcgtcggtaccgtcgcaacttcaactaccggcgcagacgc
ccagagaaccctaaaccacaagatggcaaagagaccaaggcagccgaaccatcagctgag
aacacgtccgctcccgaggccgagcagggcggggctgagtaa
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integrated database retrieval system
