Crotalus tigris (Tiger rattlesnake): 120319281
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Entry
120319281 CDS
T08476
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120319281 (RAI1)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120319281 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
120319281
NCBI-ProteinID:
XP_039223903
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQPTSSQDSSRLENYRHQSPACERQRLVTKEYYSPQQPPPQLPP
LPYQAFGENSTVEKYHRGSNKPLRGQQLPSRPSSFPNYPIQENSPYPSRYAGEDSLQGWG
SPQQQQQPPQPLPGGVAKYDDNLMKKTAAPSSSRQYHEQTPQLPFRSHSLHLQPQPGPQP
SPLTYPKLPRQKMQNEVSSSLPFSQGSHFPQHSQSFPASSTYTSVQSGGQTAHSYKSCNP
PPAPPTHERGLGSAANLPAAQRVQGLHSYQPNRISYEQQPQQPPPPPPPPSLQGRHHAQE
ALHYQNLAKYQHYNQPGQSYCQADAPVRTPDQYYQTFSPSSSHSPARSVGRSPSYSSTPS
PLMPNLENFQYSQQSLTAGTFPASLADHSHFMPLLNPSPTDGASSDAQPPANCKNLSKEK
IPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKSTGMPQKKGIKNSPRTPEQLKGQHC
SPEGNNYSAEQAGTPHSDPLSTPQSVHAETQDTDYLSGSEDQLERGFLYCSQSRSPARVN
SNSKPKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLESFTKFVAGERDCPRLLLSALS
QEELASEIIGLQDAINEKADKGWANSPAPNKDPDKSPFHLENHRTCLDSVVKSPWSNQGD
SNALAEPLKIDKGLGRNNGKNFTEEVYDNSQVSFTTTETKNSLKTTSSVGYSAKPNISVA
TSSSETPRSFSCYSNAPANSVSSENAMENFEWPDENLSDTWKELGSSLQSSELPKSLFSG
KLSEPSEEKKNASCLSLCGPEGSAEGERIAGFSQQQQASKGEGLNYDEATRTESERWLED
TARNSCSGEDFSELPMMSSPDLKESDLEPEEYSSLCELAGSEQKTLPYDAFTPKPAGNAR
VLSFQDTPGSAEEATNTVEKENTAPPSHLSDPSVLLLGPAVGTDTKVKSWFETSLHPLKP
KEESAAGENAPQDKTEMSTTLLLKKQVLPDKLTITSEPTSRGKSLRNKKLQCRLSGGEEP
IQSMSNPSLGIQAAGLVANTCPASNSLIEMPSKNTHGQTPRFPTEGLPARMCTRSFTAMT
EPRMPDPLEGAKASTPHEKLGGKKSVCVLKERVAFKARKANGKTSPKSCNPFPPLISNLT
QNEDSVVTKAKEADMVETEMKDQQSMILRSRTRTQEVFYTKRRREKTMVEVDFKNAKLPR
KVFPNNHLPGSFKISSEKETKLGKQMKARPEMAGKISERPLHALKRKSVFLPPIPAKKRN
LILRSNNHSSSSGKEETPDMSSGLFKRMPSSRRTSVKPSPKNSCEVMLKSPQAKENPGVC
IKITSRASFQGAMKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACRTVATAIPTVVPAVT
AATTAHSNPLSPSLPEREQASKITSGTPAMGEARPLNQALSQKAPAAPAAEQLCRNPNNR
SFRGKLMNSKKLSSNCFKGEAYSSPETLQLSGDSMAASTVCLLPKKRNRKGKAASFHVAK
NSLEKCPHLSPALFLATQEKPGVVAVATAAGKGDEGQREGKKPKGEDKGLGSTESVEGRS
PEAQTRAQKQRAHHANYNGYTKRQRKHHKRRKVQSVPSRCKNKTRRRHQQQAPLLSPTEP
EIRLKYVSCKRLRADSRAPPFSPYIRMEKWDEYITTCTVVNCPAEEAKLHNEQQQQHTSL
FSSLSAQAGLFGTACLRPPAILPLSSMMHLGPVVSKALNTACLVCCLCRQPANYKDQGDL
CGPYYPEDCLPKKKSRLKEKVKVEGLGEGPPSSSLAERLLKATDNNWATGSLGGKPPRLD
NGADSARQSALRSSSRGLFRKLQSCYCCDERTEGEEATAGVTVAAVEKLRRHECGKADSP
LPDPAGETQEHWVHEACAIWTAGVYLVAGKLYGLQEAIKMAVDVRCSGCQRVGATVGCCH
QGCTQIFHYTCAIDAGCLLAEETFLLNCPKHKLQLL
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgtgaaaggtgtggtttccatggcaaccagcagaactaccagccgact
tcttcgcaagattcatcacgcctggagaattacaggcatcaaagcccagcctgcgaacgt
cagaggctggtgacaaaagagtattacagcccccagcagccacctcctcagctgccccca
ttgccgtaccaagcctttggtgaaaacagcaccgtggagaagtaccaccggggaagcaat
aagccgttacgcggccagcagctgcccagcaggccgtcctccttccccaattaccccatc
caagagaatagcccctacccttctcgctatgctggagaggacagcctgcaggggtggggg
tccccgcagcagcagcagcaacctcctcaacctttacctggcggggtggccaaatatgac
gataacctgatgaaaaagacggcggccccatccagtagcaggcagtaccatgaacagaca
ccccagctgcccttccgaagtcactccttgcatctccagccgcagccgggacctcagccc
tctcccctgacctaccccaagctccccaggcagaagatgcagaacgaggtgtcctcctcg
ctacccttctcacaggggtcccactttccacagcattcccagtcctttccggcttcctcc
acctacacatcagtccagagcgggggccagacagctcattcctacaaaagttgcaaccct
cctcctgccccacccacacatgaaaggggtctgggcagtgccgctaacttgcccgctgca
caacgggtccagggtttacacagctatcagcccaaccgaatcagctatgagcaacagccg
caacagccaccgccacctccacctccaccctctctgcaaggtcgacaccatgctcaggag
gccttgcactatcaaaacctagcaaaataccaacattataaccagccaggacagagttac
tgccaagctgatgctccagtgaggacaccggaccagtattaccaaacatttagccctagc
tcaagtcactctccagctcgttctgttgggagatccccgtcctacagttcaacgccttct
cccttgatgcctaacttagagaacttccaatatagccagcagtcgctgactgctgggaca
tttccagccagccttgctgaccatagccacttcatgcctttgctgaacccgtcgccgacc
gatggggcaagctccgacgcccagccacctgccaattgcaagaacttgtccaaggagaag
atccccgagaacctcttatcggatctgagtcttcaaagcctcacagcccttacctctcaa
gtggaaaacatctccaacactgtccagcagcttctcctttccaagtccacggggatgccg
cagaagaaggggatcaaaaattcaccgaggactccagagcaactcaagggacagcactgc
agccctgagggtaacaattattctgcagagcaagcggggactccacactcggacccactc
agcaccccccagtcagtccatgctgaaacccaagacaccgattacctaagtggctccgaa
gaccagctggagaggggcttcctgtactgcagtcaaagccgtagcccagctcgggtcaat
agcaattccaaacccaagcccgaatctgtgtccacctgctcagtgacttctccagatgac
atgtcgaccaagtccgatgattccttccaaagcattcatgccagcctgccattggagagc
tttacaaagtttgttgccggtgaaagagattgcccccggctgctcctcagcgccctttct
caagaggagctggcatctgaaattattggtctgcaggatgctatcaacgagaaagcagac
aaaggctgggccaattctcctgctccaaacaaagacccagacaaatctcccttccactta
gagaatcacaggacttgccttgattctgtggtcaaaagtccctggtccaaccagggggac
tccaacgctcttgctgaacccttgaagatagacaaaggactgggacgtaataatgggaag
aatttcactgaggaggtttatgacaactcccaggtttccttcaccacaaccgagacgaag
aattccctaaaaaccaccagctctgtgggctacagtgccaagccaaacatctcggtggcc
acatccagttctgagacccccagaagcttcagctgctattccaatgcccctgccaattca
gtgagttctgaaaatgccatggagaactttgagtggccagatgagaacctcagtgacact
tggaaagagctcgggtcgagcctccaatcttcagaacttcccaagagcttattctctggc
aaactgagcgaaccttctgaggagaaaaaaaatgcctcctgcttgagtctctgtggtcct
gaaggttcagctgaaggtgaaaggatcgcaggattcagtcaacagcagcaggccagcaaa
ggggagggcttaaattatgatgaggccacaaggacagagagtgaacgatggctggaggac
actgccaggaactcctgttcaggagaagacttcagcgaactccccatgatgtcttctcca
gacctgaaagaatctgatttggaacccgaagagtattcctctttgtgtgaattagctggc
tctgagcaaaagactttgccttacgatgccttcactcctaagcctgcaggaaatgcccga
gttctttctttccaagacactccaggatcagcagaagaagccaccaacacggttgagaaa
gagaacactgctcctccttctcacttgtccgatccatctgttctccttttaggaccagca
gttggcacagacacgaaagtgaaaagctggtttgaaacttctctgcaccccttgaagccc
aaggaagagtcagcagctggtgaaaatgcccctcaagataagactgagatgtcaactacc
ttgctgttgaagaaacaagtcctaccagataagctgaccataacatcagaacccacctcc
agaggtaaaagtcttcggaataaaaagctacagtgtagactgtcgggtggagaagagcct
attcagtccatgtcaaatccaagtttaggcattcaagcagctggcctggtggccaataca
tgcccagcttccaacagtctgattgaaatgcccagtaagaacacccatggccagactccc
aggttccccacagaaggcttgccggccaggatgtgtacccgttcctttactgcaatgact
gaaccacgaatgccagaccctctagaaggtgctaaagcttcaactcctcatgagaagttg
gggggcaagaagtcagtgtgtgttttgaaagagagagtggccttcaaagctaggaaggcc
aatgggaagacatcgccaaagtcctgcaatccatttcctcccttgatctccaacttgacc
cagaatgaagactctgttgttaccaaggccaaagaagccgacatggtagaaaccgagatg
aaagatcaacaatccatgattctccgttccaggacccggactcaggaggtcttctacacc
aagcgaaggagggagaaaaccatggtggaagtagacttcaaaaatgccaaactgcccagg
aaggtgttccccaacaaccacctgccgggatccttcaagatcagttctgagaaggagacc
aagctgggcaaacaaatgaaagccaggccagaaatggccggcaaaatatctgagaggcca
ctccatgccctgaaaagaaagtctgttttcctgcccccgattcctgctaagaaacggaac
ctgatcctacgaagtaacaatcacagcagcagcagtgggaaggaagagacgccagacatg
tcttctggcctttttaagaggatgccgtcctccaggcgaaccagtgtgaaaccatctccc
aagaactcctgtgaagtgatgctcaagtccccccaggcaaaagaaaacccaggggtctgc
atcaaaatcacctcccgggcttccttccagggtgcgatgaagaccaaagttctgcccccg
aggaaaggacggggcttgaagctggaagcgattgtgcagaagatcacctctcccaacctg
aaaaagtttgcctgcagaacggtggccactgccatccccaccgtggttcccgcggtcact
gctgctaccaccgcccacagcaatcctctcagcccttcccttccagagcgggaacaggcc
tcaaagattaccagtggaaccccagccatgggggaagctcggccattaaaccaggcttta
tcacaaaaggctcccgccgctccagcagccgagcaattatgcagaaacccaaacaacaga
tccttcagaggaaaactaatgaacagtaagaaactgtcctccaactgcttcaagggtgag
gcctattcatctcccgagacattgcagctcagcggggacagcatggctgcaagcaccgtc
tgcctgctgcctaagaagaggaacagaaaggggaaagctgcctccttccacgtggccaaa
aatagcttggagaagtgtcctcacctgagcccggctttgttccttgcaacccaagagaaa
cctggggtggtggcggtggccacggcggctgggaaaggcgatgagggacaaagggaaggg
aaaaagcccaaaggcgaagacaaaggcttggggagcaccgagagtgtggaagggaggtcc
cccgaggcccagacgcgggcccagaagcagcgagcccaccatgccaactacaacggctac
accaagagacaaaggaagcatcacaagcgccggaaggtccaaagtgtaccctcgcggtgc
aaaaacaagaccaggcgacggcaccaacagcaggcacctctgctgagccccacggagccc
gagatccggctcaagtatgtctcctgtaagcggctgagggcggacagccgggcaccaccc
ttctcaccatacatccggatggagaagtgggatgaatacatcaccacctgcacggtcgtc
aactgcccagctgaagaggcgaaactccacaatgagcagcagcagcagcacacttctttg
ttttcttctttgtctgcccaagctgggctttttgggaccgcttgtctgcggcctccagcc
atcctacctctgtcgtccatgatgcaccttgggccggtggtctccaaggccctcaatact
gcctgcttggtctgctgcttgtgccgtcaaccggccaattacaaagaccagggggacctc
tgtgggccatactaccccgaggactgcctgccgaagaagaaatcgaggctgaaagagaag
gtcaaagtagaggggctgggagaaggacctccctcgtcctcgttggcagaaagactgctc
aaagcaacagataataattgggcaaccggttctctggggggaaagccaccaaggttggac
aatggtgctgactcagcaagacagagtgctctccgttcgagttcaaggggactgtttagg
aaactgcaaagctgttattgttgcgatgagaggacagagggagaggaggctacggcaggg
gtgacagtagcagcagttgagaagcttcggaggcacgaatgcggcaaagctgattcgcca
ctgccagaccctgctggagagacgcaggagcactgggttcatgaagcctgtgctatatgg
acagctggggtgtacctcgtggcagggaaactctatggactgcaggaggcaataaagatg
gccgtggatgtgaggtgttctggctgtcagcgagttggggcaaccgttggctgctgtcac
caggggtgcacccagatatttcactacacatgtgccattgacgcaggttgtttgttagct
gaagagaccttcttgctcaactgccctaaacacaagctgcagctgctataa
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