Crotalus tigris (Tiger rattlesnake): 120319422
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Entry
120319422 CDS
T08476
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03030
DNA replication
ctig03420
Nucleotide excision repair
ctig03430
Mismatch repair
ctig03440
Homologous recombination
ctig03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120319422 (RPA1)
03420 Nucleotide excision repair
120319422 (RPA1)
03430 Mismatch repair
120319422 (RPA1)
03440 Homologous recombination
120319422 (RPA1)
03460 Fanconi anemia pathway
120319422 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120319422 (RPA1)
03032 DNA replication proteins [BR:
ctig03032
]
120319422 (RPA1)
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120319422 (RPA1)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120319422 (RPA1)
DNA replication proteins [BR:
ctig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120319422 (RPA1)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120319422 (RPA1)
MMR (mismatch excision repair)
120319422 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
120319422 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
120319422
NCBI-ProteinID:
XP_039224193
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MAEAARLSEGAIAAILLQAEPVGRPVLQLITIRPISTGNGPPRYRMLMSDGVNSLSSFML
ATQLNPLVDDQSLTANAICQINRFIVNTLKDGRRVVVLMEMEVLQPGHAVPTKIGNPVPY
VEGPGQAGRQPVAPSPATGPVQSKPAGLQSGAPDAGAQYPSTSRLLGNAGGSSILSTPGG
SQVKVVPIASLNPYQSKWTVCARVTQKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFN
DQADKFFPLLELNKVYYFSKGTLKTAKKQYTSVKNDYEIAFSNETTIVPCEDAHHLPSVQ
FDFVDIGELENTDKDSLVDVIGVCKSYEDPQKITIKASNREVSKRELHLMDMSGKTVTVT
LWGADAENFDGSRQPVVAIRGARVSDFGGRSLSVISSSSLLVNPDCPEAFKLRGWFDSEG
QHVESASISSGWGGLATGGNTNWKTLQESKAENLGQGDKADYFSCVGTVVYLRKEGCMYQ
ACPSQDCNKKVIDEHNGLFRCEKCDREFPNFKYRMILSVNIADFQDNQWVTCFQETAEAI
LGHNTAYLGELKEKNEPAFDEVIQNANFTSHEFRIRVKMETFNDESRLKATAMEVKPINY
QEYCKRLILNIRKNAAQLD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcgaggctgagcgagggggccatcgcggccatcctgctgcaggcggag
ccggtggggaggccggtgctgcagctgatcacgatccgccccatctccacggggaatggc
cccccacgctaccggatgctgatgagcgatggtgtgaactccctttcctcttttatgctg
gccacgcagctgaaccctctggtggatgaccagagcttgaccgcaaatgccatttgccag
attaaccgcttcattgtgaacactctgaaggatggaaggcgagtggtggtcttgatggaa
atggaggtgctgcagccgggtcacgccgtccccaccaagattggaaatccagtcccgtat
gttgaaggacctgggcaagcagggaggcagcccgtggcccccagcccagcaaccggccct
gtccagagcaagccagcggggctccagagcggggctccagatgcaggagcacagtacccc
agcacttccagactgctggggaacgcagggggctccagcatcctgagcactccgggggga
tctcaggtcaaagtggtgcccatcgccagcttgaacccttaccagtccaagtggaccgtc
tgtgcccgggtgacccagaagggccagatccgcacctggagcaactcccggggcgaaggg
aagctcttctccatagagatggtggatgagagcggtgagatccgagcgacggcctttaac
gaccaagcggacaagttttttcctctcctcgagctgaacaaggtctactacttctccaag
ggcaccctgaagacggccaaaaagcagtatacgtctgtgaagaacgactacgagatcgcc
ttctccaacgagacgaccatcgttccctgcgaggacgcccaccatctgccctctgtgcag
tttgacttcgtggacatcggggaattggaaaacacagacaaggactccctcgtggacgtg
atcggggtctgcaagagctacgaggaccctcaaaagatcaccatcaaggcttccaatcgg
gaggtctccaagagagaactgcacctgatggacatgtcgggcaagacagtgacggtcact
ctctggggcgcggacgcggaaaactttgatggctctcggcagccggtagtggccatccgg
ggggcccgagtctcggactttgggggccggagtctctccgtgatctcctccagcagcctc
ctggtgaaccccgactgcccggaggccttcaagctgcgaggctggtttgattcggaaggg
cagcacgtggagtccgcctccatctcttccgggtggggcgggctggcgacaggggggaac
accaactggaagaccctgcaggagtccaaggcggagaacctgggccaaggagacaaggcc
gactacttcagctgcgtgggcacggtggtgtacctgcgcaaggagggctgcatgtaccaa
gcctgcccctcccaggactgcaacaagaaggtgattgacgagcacaacggcctcttccgc
tgcgagaagtgcgaccgggagttccccaacttcaagtaccgcatgatcctgtcggtgaac
attgcggacttccaggacaaccagtgggtgacctgcttccaggagactgcggaggccatc
ctggggcacaacacggcttacctgggggagctgaaggagaagaacgagcccgctttcgac
gaggtcatccagaatgccaacttcacctcccacgaattccggatccgagtcaagatggag
acgttcaatgatgagtcgcgcctgaaggccacggccatggaggtgaagcccatcaactac
caggagtactgcaagaggctcatcctgaacatccgcaagaacgctgcccagctggactga
DBGET
integrated database retrieval system
