Crotalus tigris (Tiger rattlesnake): 120319737
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Entry
120319737 CDS
T08476
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120319737
03041 Spliceosome [BR:
ctig03041
]
120319737
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120319737
Spliceosome [BR:
ctig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
120319737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
XMAP215_CLASP_TOG
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120319737
NCBI-ProteinID:
XP_039224811
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MIQVARRPSTNHIYNHTWKNFCHWCNRNHLFSLMEMKPPISRAKMILITKAAIKAIKLYK
HVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFCKNITATFQYLYL
CPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGASSATSVTEDATNNEGSPQPATIP
SEPPQVGANSVPAVAQVPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPVIDNNV
MAQVQAITAQLQTTTTQPSEQKHDFQIPEQKTSFDKKLLDRFDYDDEPEAVEDTKKEEAT
PSPSLSQPTFGFPGEGLQPPVYPQLPNIDQFQQRMLGMQQDAMLHQIPLPPNGQMPSYGL
LPTPQFTPITQQVIQSSPQVQQPFQSSFPAQSESHLQKAHQQELEVDQHPTQEGKRHENR
KSRSRSASRSPKRRRSRSGSRTRRSRHRRSRSRSRDKRRHSPRSRSQERRERERERERRV
KGLPPIKPETVSVCSTTLWVGQLDKRTTQQDVGGLLEEFGLIESINMIPPRGCAYIVMVQ
RQDANRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYVPWGKVKPEDL
ESFCEGGMLDNDTLSPEWKGIPKKSENQLAQNGGAGSADSAHNEQTSPVAKALPIQMPVP
IPSPITIPPPQVPPHQPGPPMVGTLQPPTFTPPLGIPPPGFGPGVPPPPPPPFMRPGFNP
MHLPPGFLPPGPPPPINPSVSVPPVSVPPSGGVTIPNSTVASINEDTTKDSSVGNPIPTV
VSGARGNGENAEGSKGYPNAPPPVTSASISAPVSQPVPLLGTQGVTSSPVIGLQTPSTGL
LGARPGLIPLQRPPGMPPPHLQRFPMMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKGPF
PPPGHFARPSGMPGGGPVGSEDNRDGRQFRNDRPPFTPHRDQERFGRRSFGNRIENERER
YGNRNDDREHERLGNRERREWGRRSPERDRHRDLEERNRRFSGHRERDSRDREPHREKDE
NRGKEKPELTDRVDGVKNYESQSSKIENTDSVSELNKESEPIGVKPNEEVASESTSSLEK
PEKPTGSVVEAPR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggttgccagaagaccgtcgactaaccatatttacaaccatacgtggaagaac
ttctgtcattggtgcaacaggaatcacctcttctcattgatggagatgaagcctccaatt
tctcgtgcaaagatgattctcattactaaagctgccattaaagctattaagctttacaaa
catgtagtccaaattgtagagaagtttattaaaaagtgtaagcctgaatataaagttcct
ggactgtatgttattgactccattgttcgccaatctcgacatcaatttggaacagacaag
gatgtttttgggccaagattctgtaagaatataactgccacattccagtatttatatctc
tgtccatcagaagataagagtaagatagttcgtgtcctcaacttatggcagaaaaatggt
gtgttcaaaatagaaataattcagccacttctggacatggcagcaggagctagcagtgca
acctcagtgacagaagatgccaccaataatgaaggttcaccacaacctgctacaattcca
tctgagccaccacaggttggtgctaattcagtacctgctgtggcacaggtgcccagttct
gatgcatttgctgctgttgctcagttatttcaaacaacacaaggacagcagctccaacag
attctccagacttttcagcaacctcctaaacctcagtctccagtaatagataataatgta
atggctcaggttcaagctatcacagctcagctgcagaccacgacaacacaaccatcagaa
caaaagcatgatttccaaataccagaacaaaaaacatcttttgataagaagctgttggat
cgctttgactatgatgatgaaccagaagcagtagaagatacaaaaaaagaagaggccaca
ccttctccttcactctctcaaccaacatttggatttccaggtgaaggcttacaaccacca
gtttatcctcagcttccaaatatagatcagtttcagcagagaatgctgggaatgcaacag
gatgcaatgcttcaccagatccccctccctccaaatggacagatgcctagctatggactt
ctgcctacaccgcagtttactcctataactcaacaggttatacagtcttcacctcaggtg
cagcagcctttccagtcttcttttccagcacaaagtgaatcacatttacagaaagcacat
caacaggaactggaagtggatcagcatccaactcaggaaggaaaaaggcatgagaacaga
aagtcaagatctagatcagcatcaagatcacctaagagaagaagatcacgatctggttct
cgaactcgaagatcacgccatcgtcgttctcgttctcgatcccgggacaagcgacgtcat
tctcctaggtcaaggtcccaggaaagacgtgagagggagagagagcgagagcgcagagtg
aaaggccttcctccaatcaaaccagaaactgttagtgtttgcagtacaactctttgggta
ggacaactggacaaacgaacaacacagcaggatgttggaggtctcttagaagagtttggt
ctaattgaatctataaatatgatacccccaagaggatgtgcttatattgtaatggtacag
agacaagatgcaaaccgtgctctgcagaaactgagtcgtggtaattttaaagtgaatcag
aaatctataaagatcgcttgggctttgaataaaggaattaagccagactataagcagtat
tgggatgtagaattgggtgttacctacgtaccatggggtaaagttaaacctgaagatttg
gaaagcttttgtgaaggaggaatgctggataatgatacacttagtcctgaatggaaagga
attccaaaaaaatcagaaaaccagttagcccagaatggaggggctggaagtgctgattct
gcacataatgaacaaacatcacctgtagctaaagctttgccaatccaaatgcctgtacct
ataccttcaccaataacaataccacccccacaggtgccaccacatcaaccaggtcctcca
atggttggtactcttcagcctcctacatttactcctccattaggaattccacctcctgga
tttggtcctggagttccccctccaccaccaccaccatttatgcgaccaggcttcaatcca
atgcatttaccgccaggttttcttcctcctggaccaccacctcccattaatccttcggtt
tcagttcctccagtttctgtccctccttctggaggagtaactatcccaaattctactgtg
gccagtataaatgaagacactacaaaagactcttctgtaggaaaccctattcctacagta
gtttctggagctagaggaaatggtgaaaatgcagaaggctccaaaggatatccaaatgct
cctccacctgtaacttctgctagtatatcagctcctgtatcccaaccagtcccacttctt
ggtactcaaggagttacatctagtccagtgattgggcttcagacaccttctactggcctt
ttaggtgcccgacccggtttgataccacttcagagacctccaggaatgccaccacctcat
ctgcaacgtttcccaatgatgccacctcggcatatgcctcctcatatgatgcacagaggt
ccacctccaggcccaggtggttttggaatgcctccacctcatgggatgaagggccctttc
ccacccccaggtcactttgcaaggcctagtggaatgcctgggggtggtccagttggatct
gaagataatagagatggaaggcagttcaggaatgacaggccaccatttactccacataga
gaccaggaaaggtttggaaggagatcttttgggaatcggatagaaaatgaacgtgaacgc
tatggcaaccgtaatgatgacagagagcatgaacgccttggtaatcgtgaaaggagagaa
tgggggagaagaagccctgaacgtgatagacacagagacttggaggaaagaaatcggcgt
ttcagtggacacagagagagagattctagagatagggaaccccatagagaaaaagatgaa
aatcgaggaaaggagaaacctgagctaacagacagagtagatggggtgaaaaactatgaa
tctcagagcagtaaaatagaaaatacagactctgtttcagaacttaataaagagtctgaa
cctattggtgtgaaaccaaatgaagaagtagcatctgagtctacctcatctcttgaaaaa
cctgaaaaacctactggctcagttgtggaggctcctcgctag
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