Crotalus tigris (Tiger rattlesnake): 120319779
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Entry
120319779 CDS
T08476
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04137
Mitophagy - animal
ctig04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120319779
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120319779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120319779
03009 Ribosome biogenesis [BR:
ctig03009
]
120319779
04131 Membrane trafficking [BR:
ctig04131
]
120319779
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctig04147
]
120319779
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120319779
Ribosome biogenesis [BR:
ctig03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120319779
Membrane trafficking [BR:
ctig04131
]
SNARE
SNARE associated proteins
Others
120319779
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120319779
Exosome [BR:
ctig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120319779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
120319779
NCBI-ProteinID:
XP_039224935
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGPDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDSCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWQDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGSGGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggacccgattccaaagcggatgatttatcaactgcaattctgaagcagaag
aaccggcccaatcggttaattgttgatgaagcaatcaatgaggacaacagtgtggtgtcg
ctgtcgcaggccaagatggatgaactgcagctgttcaggggagacacggtcctcctcaaa
ggcaagaaaaggcgagaggccgtctgcattgtgctctccgatgactcctgctcggatgag
aaaatccgcatgaaccgagtggttcgcaacaacctaagggtgcgtctaggagacgtcatc
agcatccagccttgtccggatgtgaagtacggcaagcgtatccacgtgctgcccattgat
gacaccgtggaagggatcacagggaacctctttgaggtctatctcaagccctacttcctg
gaagcctacagacccatcagaaaaggggacatcttcctggtgcgcggaggcatgcgcgca
gtggaattcaaggtggtggagacagaccccagcccctactgcatagtggctccagatact
gtgattcactgtgagggagaaccgatcaagcgagaggacgaagaggaatctctgaacgag
gtgggctatgatgacattggaggctgccgaaagcagctggctcagatcaaggaaatggtg
gagctgcctcttcgacaccctgctctcttcaaggcaatcggggtgaagcctccccgtgga
atcctcttgtatggtccgcctggtaccgggaagaccttgattgctagagccgtggctaac
gagactggagcgtttttctttctaattaatggtcctgagatcatgagcaagctagcaggg
gagtcggagagcaacctgcgcaaggcctttgaggaagctgagaagaatgcgcccgccatc
atcttcattgacgagctggatgccattgctccaaagagagagaagacccatggggaagtc
gaacggcgcattgtgtcccagttgctgaccctcatggacggcctaaagcagcgagctcac
gtcattgtcatggctgccaccaacagacccaacagcatcgatccagccctccggcggttt
ggtcgttttgacagggaggtggacattggcattccggacgctactggccgcctggagatc
ttgcagatccacaccaagaatatgaagttggctgatgatgtggatctggagcaggtggcc
aatgagacccacggccatgtgggagctgacttggccgcgctgtgttcagaggcggccctg
caagccatccggaagaagatggacctgattgaccttgaagatgagactattgatgctgaa
gtgatgaactccctggcagttaccatggatgacttccggtgggctctaagccagagcaat
ccttcagcactgcgcgagaccgtagtggaagtcccacaggtgacctggcaagacattgga
ggcttggaagacgtcaagcgggaactgcaggagctggttcagtacccagtggagcatcct
gacaaattccttaagtttggcatgaccccatctaaaggggttctcttttatggcccccct
ggctgtgggaagaccctgctagccaaagccattgccaacgaatgccaggccaatttcatc
tccatcaagggcccagagttgctcaccatgtggtttggagagtccgaggccaacgtgcgt
gagatctttgacaaggcccgccaagccgctccctgcgtgctgttcttcgatgagctggat
tccattgccaaggcccgcggtgggaacattggtgatggcggcggtgccgctgaccgagtg
atcaaccagatcctcacagagatggatggcatgtccaccaagaagaacgtgttcatcatt
ggtgcgaccaaccggccagacatcattgatccggctatcctgcgccctgggcgcctggac
cagctcatctacattcctctgccagatgagaagtctcgtgtggccatcctcaaagccaac
ctgcggaaatcgcctgttgccaaggatgtggatctggagttcctggcaaaaatgaccaat
ggcttctcgggagctgacctcacagagatttgccagcgagcttgcaagctggccatccgc
gagtcgattgaaagcgagatcaggcgggaacgagagaggcagaccaatccctcggccatg
gaggtcgaagaggacgacccggttcccgagatccgtcgggaccactttgaggaagccatg
cgctttgcccgccggtcagtcagcgacaacgacatccgcaaatacgagatgtttgcacag
actttgcagcagagccgtggctttggcagcttcagattcccatcaggtaaccaaggtggt
gctggacccagccagggcaccggaggcagcggcggcggcaacgtttacagtgaagacaac
gatgacgatctctatggttaa
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integrated database retrieval system
