Crotalus tigris (Tiger rattlesnake): 120319809
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Entry
120319809 CDS
T08476
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120319809 (TAF1C)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
120319809 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
120319809
NCBI-ProteinID:
XP_039224990
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MAAFPDALLPGLFRPGPPGREGPGAGLRVAGWGQCGQVGVAAREPGAPPLFLPRRCRRAR
ENWLPAEAAPLPLKTPDAAPRTAGPPAGPALTALVPQLGRLFLDHPEAAFGATARLLHQH
VYLGDSTNWRRAGGVCGMTRFLRALEGPTRGGSLSGVASVCRDWLSELPLKLVAEWLHED
LAERRRRLSFDDTPTGGALAWLPDRTPGEPTRRGCLVFPAGEAKDRLCFQEAVLRPAASS
NALRPELRGCPAQFELNGAVRQVAATHLEGSDFLGVRSDHFCAAWRQQRGRAPTPLQVVC
TEAPCSSITVSPHLPGELSLCTLAGELYLWNVETGLRRLHQDRDSLFFRDPSPWRWSEFS
AHPRVLTFADRTGLKGLDQRVSSGGCFELFKIGSEADCQRGERLVLSKYLGHSEPFHHLV
TTQFSVFVLDERFPLVPVLRWEHMMQWPPIYAHLTPAGAPQHNHRVLLSAHHSQELLLLQ
YSGGHSLPCQLQGAPQKLPSIKECLPHFPVQVPVRQSALNQRLSVPTTGIAAALGQQDGI
QTLLVFQLSEAGDLFYQPLLPQASGEEAGGHAPTDLDPEASFGDAVVDRACQEPSFPDGA
KTASSPVAAALYRRWLRAWKRATPHAQNWQFPPATLNQGCLFAHRETRGVEGSVPSSLEA
SHCLRMAMQEERLFCSWGDESRVPVPPVSLGPLGELGQRLAANWAGDWVAWWLERLGSTK
ARQQALREKRRRAKRRRGTQSLSGSFTSSTSYQSELSDWSGRDSRAPRSPPALPMEPPLQ
APPALPLSSQEDSELLSSQSLSARGIPRERRQTLRRYLAVLDQPPEPPEDDLPASQSSAL
GSSQRGPSSSQGPQQKRARMGF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttccctgatgctctcctgcccggcctcttccgcccggggccgcccgggcgc
gagggtcccggggccggattgcgggtggccggctggggccagtgcggacaggtgggcgtc
gcggctagggagccgggagcgccgccgctcttcctgccccgccgctgccggagggcgcgg
gagaactggctgcccgccgaggccgccccgctgccgctgaagaccccggacgcggcgccc
cgaaccgccggcccgcccgccggcccggccctgaccgccctggtcccgcagctgggccgg
ctcttcctagaccacccggaggcggctttcggggccacggcccggctgctgcaccagcac
gtctacctgggggactcgacgaattggcggagagccggaggcgtctgcgggatgacccgc
tttcttcgtgccttggaaggcccgacgcgaggcggcagcctctccggcgttgcctcggtg
tgccgcgactggctgtctgagctacccctgaagctggtggccgagtggctccacgaggac
ctggccgaacggcggcggcgcctatcgttcgacgacacccccaccggcggtgccttggcc
tggctgcctgaccgcacccctggagaacccacacgccggggttgcctggtgttcccagcc
ggggaggccaaggaccggctctgcttccaggaggcggtcctgagaccagcggccagcagc
aatgccctgagacctgaactccgtggctgccccgcccagttcgagctgaacggtgcagtc
cggcaagtggcagccacccacctggagggcagcgacttcttgggggtccgctcggaccat
ttctgtgcggcatggaggcagcagcgtggaagggctcccacccctctgcaagtggtttgc
acagaagccccctgctcttccatcacagtcagcccccacctacccggcgagctgtccttg
tgcaccctggcaggggagctgtacctgtggaacgtggagacggggctccgacggctgcac
caggaccgcgacagcctcttcttccgggacccttctccttggcgctggagtgagttttct
gcccacccacgagtgctgacatttgccgaccgcactggcctgaagggtctcgaccagagg
gtgtcctctggtggctgctttgagctcttcaagatagggagtgaagcagactgccagcgt
ggggaacgcctggttctctccaagtacttgggccattcagagcccttccaccacttagtg
accacacagttttcggtctttgtgctggacgaacgcttccccctggtgcctgtcctgcgc
tgggagcacatgatgcagtggccacccatctacgcccacctcacgcccgccggggctcca
cagcacaaccacagggtgctcctgagtgcccaccattctcaggagctgctcctgctgcag
tactcaggtggccacagcctcccttgccagctccaaggtgccccccagaagttgccatcc
atcaaggagtgcctgccccacttccctgtgcaggtgcctgtgaggcagagcgccctcaac
cagcgtctctccgtccccacgacaggcattgcagcagccctcggtcagcaggacggcatc
cagacactgctggtcttccagctttctgaggccggggacctcttctaccagccgctgctc
ccacaggccagtggggaggaggccggggggcacgctcccactgacttggacccggaggcc
agcttcggagatgccgtggtggacagagcctgccaagaacccagttttccagatggagca
aagacagctagtagcccagtagccgcagccctctaccggcgctggctgagggcctggaag
cgggccaccccacacgcccaaaactggcagttccctccggccacgctcaaccagggctgc
ctcttcgcccaccgagagacgaggggagtggaggggagtgtcccgtcctctctggaggct
tcccactgcctgcgcatggccatgcaggaagagcgactcttctgctcctggggggacgag
agtagggtccctgtgcctcctgtctccctggggcccctgggagagcttggccagcggctg
gcagctaactgggccggcgattgggtggcctggtggctggagaggctgggctccaccaag
gcccggcaacaggcgctgagggagaagcggaggcgagccaagcggcgcagggggacgcaa
agcctgtccggcagcttcacctcctccaccagctaccagtcagagctcagcgactggtcc
gggagggacagcagggcccccaggtcccctccggctttgcccatggagccccccctccag
gctcccccagccctgccgctcagttcccaggaggactcagaactgctgtcctcccagagc
ctgagcgctcggggcatccccagggagcgtcgccagaccctgcgaaggtacctggcggtc
ctggaccaacccccggagccgcctgaggacgacctgccggccagccagtcctcagccctg
ggcagcagccagcggggcccctcctcttcccagggaccccagcagaaacgggcccgcatg
ggcttctga
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