Crotalus tigris (Tiger rattlesnake): 120319925
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Entry
120319925 CDS
T08476
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120319925 (DSCAM)
Cell adhesion molecules [BR:
ctig04515
]
Immunoglobulin superfamily
DSCAM family
120319925 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
Pur_ac_phosph_N
C2-set_2
Ig_4
V-set_CD47
Sp38
C1-set
Ig_C17orf99
Interfer-bind
fn3_2
C2-set_3
ChitinaseA_N
DUF6377
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
120319925
NCBI-ProteinID:
XP_039225226
LinkDB
All DBs
Position
Unknown
AA seq
2008 aa
AA seq
DB search
MWRLAALLFQSILNVFGEDLHASLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGSRFLITSTGA
LYIIDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFEHRKAMAGQ
QVELPCKASGHPAPKYRWLKDNVPWEPDSRFRPMVTGLLIENTRPSDSGNYVCEVWNSYG
TAEVIGRLHVKQPLKATISPRKVKSSVGSRVSLSCSVSGTDDHELFWYRNGEIINTGNNV
RIIGINHETLIMDGMSKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSP
GEGVSLMCNVKGTPLPTITWTLDENPIIKDGNHRISQIITSEGNVVSYLNISSTQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTFIHCRVIGYPYYSIKWYKN
SNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPIDQDGIYGKAVILNCSAEGYPVPT
IVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYFVSTK
EVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARS
IALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHASSTYNIRM
YAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGVIRGY
QIGYREYSAGGNFQFNIISIDTTGDSEIYTLDNLKKFTQYGMVVQACNRAGIGPSSQEII
TTTLEDVPSSPPENVQAIATSPETISITWSTLAKDSLNGILQGFRVIYWANLLDGELGEI
KNVTTVQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASTVFVSWLPPIKLNGVIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIILPCKAVGDPVPTVKWM
KESNGTPSLVMIDGRRSIFSNGSFVIHTVKAEDSGYYSCVATNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLET
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINSTRVRLNLIGWN
DGGCPITSFILEYRPFGTTVWTTAQRTSLTKSYIVYDLQEATWYELQMRVCNSAGCAEKQ
AKFATLNYDGSTIPPLIKSVVQSEEGLATNEGLKMLVTISCILVGVLLLFVLLLVVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTS
STPSESGICRFTASPPKPQDGGRVTNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVPGTSR
DLGLGQTCLEPQKSRTLKRPAVLEPVPVEASSTREAQSWQSGGVATLPQREGAELGQAAK
MSSSQESLLDSRSHLKGNNPYAKSYTLV
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggctggccgccctcttgttccagagcatcttgaatgtttttggtgaagatcta
catgccagcttatattttgtcaatgcatctttgcaagaggtagtgtttgctagcaccacg
gggacattggtaccctgtccagcagcaggaatccctcctgtgacgctcagatggtaccta
gcaacgggcgaggagatctacgatgtcccagggatccgccacgtccaccctaatggcact
ctccaaattttccctttccctccttcaagctttaataacttaatccatgataacacttac
tattgcacagctgaaaatccttcagggaaaatcagaagtcaggatgttcacattaaggcc
gttttacgggaaccatatacagtccgtgtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatcccctcctctgtggaggcctacatcactgttgtctcatgg
gagaaagacacagtctcacttgtctcaggatctagatttctcatcacatccacgggagcc
ttgtatattatagatgtacagaatgaagatggattgtataattaccgatgtatcactcgg
cacagatacactggggaaacacgtcagagcaacagtgctagactttttgtatcagaccca
gcaaactcggctccatctattctggatgggtttgaacatcgtaaagccatggcaggacag
caagtggagctgccttgcaaagcatctggacacccagcaccaaaatatcgctggctgaag
gacaatgttccctgggaacctgatagccggttccgaccaatggtgacaggccttctgata
gaaaatacgcgtccatcagattcaggcaactatgtgtgtgaagtctggaacagttatggt
acagctgaagtgataggccgtttgcatgtaaaacagcctctaaaagccaccatcagtcct
cggaaagttaagagcagcgttggcagtcgagtatccttgtcctgtagtgtgtctgggaca
gacgatcatgaactcttctggtatcgaaatggagaaatcatcaatactggcaataatgtg
agaatcattgggatcaatcatgagactcttattatggacggcatgtccaaaagtgatggc
ggagcataccagtgttttgtacgcaaagataagatgtctgcacaagactatgttcaagtg
gtgctagaagatggaactcctaaaataatttcagccttcagtgagaaagtggtaagcccc
ggagaaggtgtatctttgatgtgcaatgtaaagggaactccccttcctacaatcacgtgg
actttggatgaaaatcccataattaaagatgggaaccaccgtattagtcagatcatcacc
tctgaggggaatgtggtcagctacctaaacatctccagtactcaggtccgagatggcgga
gtatatcgttgtactgccaacaactcagcaggagtcgtcctctaccaggctcgaataaac
gtaagaggaccagccagcattcggccaatgaaaaatattacagcaatagcagggcgggat
accttcattcactgtcgggtcattggttatccttattactcaatcaagtggtacaagaat
tctaatctgctcccttttaatcatcgtcaagtagcatttgaaaacaatggaacactaaag
ctctcagatgtgcagaaggaggtggacgagggggaatacacatgcaatgttctggttcag
ccccaattgtccactagccagagtgtacacgtgacagtaaaagtgccaccttttatccag
ccctttgaatttccgaggttctctattggccagagagtcttcattccatgcgttgtggtc
tcaggggacttgcctattacaatcacctggcagaaggacggtaggccaattccagccagt
cttggggtgactattgacaacattgacttcaccagctccttacggatttctaatctttcc
cttatgcacaatggaaactatacctgtatagcaagaaatgatgcagcagctgtggagcac
caaagccaattaattgttagagttccccccagatttgtggttcagccaattgatcaagat
gggatttatggaaaagctgtgatcctcaactgctctgcagaaggctatcctgttcctacc
attgtctggaagtattccaaaggtgctggagttccccagttccaaccaattgccttgaat
gggcgtatccagcttctgacaaatggctccttgttgatcaagcatgttctggaagaagat
agtggatactacctctgcaaggtcagcaatgatgtgggggctgacgtcagcaagtccatg
tacctcactgttaaaattcctgctatgataacctcctatccaaataccaccttggcaaca
cagggtcaaaagaaagagatgagttgcacagctcatggggaaaaacccatcatagtccgc
tgggagaaagaagatagaataattaatcctgaaatgtcccgctattttgtttctacaaaa
gaagtgggtgatgaagttatctctactttacagattttgccaacagtgcgagaagattct
ggtttcttctcctgccatgcgattaattcatatggagaggatcgtggaataattcagctc
actgtgcaagaacccccagatcctccagaaatagaaattcgagaagtgagagcacgtagc
attgccctaagatggaccatgggatttgatggaaatagcccaatcacaggctatgatata
gaatgcaaaaacaagtctgactcctgggattctgtccaaagaaccaaagatgtttcccca
cagttgaatcaagccacgatcattgatctacatgcttcttccacctacaacatccgcatg
tatgcaaaaaatcggattggcaaaagtgaagccagcaatgaacttactatcaccacagat
gaagcagctcctgatggaccacctcaggatgttcaacttgagcccatatcttcacaaagc
attagggtaacctggaaggcgccaaagaagcatttgcaaaatggagttattcgtggttat
cagattggttatcgggaatacagcgcaggaggcaatttccagttcaacatcatcagtatt
gatactactggagacagtgaaatttataccttagataaccttaaaaaattcacacaatat
ggcatggttgtgcaggcatgtaatcgagctggaataggaccatcttctcaagaaattatc
actactactcttgaggatgttcctagttcccctccggagaatgtccaagccattgctaca
tcaccagaaaccatctctatcacctggtccacgctggccaaagattccctcaatggaatt
ctacagggatttagggtcatatactgggctaatcttttggatggagagctgggagaaatt
aaaaatgtcactacggtacagccatcgttagaacttgatggtttggaaaaatacaccaac
tatagcatccaggtgctggcattcacacgagctggagatggggtcaggagtgaacagatt
ttcacacggacaaaggaggatgttccaggtcctcctgctggagttaaagcagctgcagca
tcagcttctactgtgtttgtatcttggctgcctcccatcaaattaaatggtgtcatccga
aaatatactgtattctgctctcatccatatcccacagtaatcagcgaatttgaagcttct
cctgactcattttcctacagaatccctaatttgagccggaatcgacaatacagtgtctgg
gttgtggctgtaacagctgcaggaaggggcaacagcagtgaaattatcaccgtggaacca
ttagctaaagctccagccagaattttgacattcagtggcacagtaacaaccccatggatg
aaggatattattctcccttgtaaagctgttggagatcctgtacctactgttaaatggatg
aaagaaagtaacgggacacccagtctagtgatgattgatgggcgaagaagcatctttagc
aatggcagctttgttatccatacggtgaaagcagaagattcaggatattacagttgtgtg
gctactaataactggggatcagatgaaattattttgaatttgcaagttcaagttccacct
gaccagcctagacttactgtatccaaaaccacctcttcctccatcactctttcctggata
cctggagacaatggaggcagctctattcgaggttatatattgcaatattctgaggacaat
agcgaacaatggggaagttttcccattagccctagtgaacgttcctatcgattggaaaca
ctgaagtgtggcacgtggtacaagtttactctgacagcacagaatggagtgggaccaggc
cgtatcagtgagatcatagaggccaaaacacttgggaaagagccacaattttcaaaagaa
caagaactctttgccagtattaacagcacacgagtaagattgaaccttattggctggaat
gatggtggttgtccaatcacctcctttattctggaatacaggccatttgggacaacagtg
tggactactgcacagcgaacatcacttaccaaatcatatatagtgtatgatcttcaggag
gcaacctggtatgagctgcagatgagagtctgtaacagtgctggctgtgctgaaaaacag
gcgaaatttgcgacactcaactatgatgggagtacaatccctccactcattaaatcagtt
gtccaaagtgaggaaggtctggcaaccaatgaagggctaaagatgctggtgactatttcc
tgtatcttggttggggtcttgctgctttttgtgcttctgctggttgtaagaaggagacgg
agggaacagagactgaaaagactcagagatgcaaaaagtttggctgaaatgcttatgagc
aagaatacaaggacatcggatacacttaacaagcagcaacagacattgaggatgcatata
gatattcccagagctcagcttctcattgaagagagagatacaatggaaactattgatgac
agatctacagtcttgctaaccgatgctgattttggagagacatcaaaacagaaatcattg
acagttactcatacagtacattatcagtcagtctcacaagccactgggccactggtggat
gtttctgatgccagaccaggaacaaatcctacaaccagaaggaatgcaaaagctgggcct
acagcccggaacagatatgctagccaatggactctcaatagaccccatcctacaatatca
gcccacactttaacaacagattggaggctgccaactcccagggccacagggtctgttgat
aaagaaagcgatagctacagtgttagtccatcgcaagatacagatcgagcaagaagcagc
atggtctccacagaaagtgcctcctccacatatgaagagctagccagagcatatgaacac
gccaagatggaagagcagctgcgccatgcaaagtttaccatcacagaatgcttcatatca
gacacctcatcagagcagcttacggcagggactaatgaatatacagacagcctgacctca
agcaccccatctgaatcagggatttgcagattcactgcatctcctcccaaacctcaggac
ggaggacgcgtgacaaacatggctgttccaaaggcacatcggccaggtgacctcatgcat
ttgccaccgtatcttcggatggactttttgttaaaccgaggagttccaggcactagcaga
gacttgggtttgggacagacctgcctggaaccccaaaaaagccgaaccttgaagcgcccg
gccgtcttggagccagtccctgtggaggcttcctccacgagagaagcacagtcatggcaa
tctggtggcgtagcaacattacctcagcgagaaggagctgagctaggacaggcagcaaaa
atgagcagctcccaagaatccctcctggactctcggagccacttaaaaggaaacaatccc
tacgcaaaatcttatacgcttgtataa
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integrated database retrieval system
