Crotalus tigris (Tiger rattlesnake): 120319943
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Entry
120319943 CDS
T08476
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120319943 (GEN1)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120319943 (GEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
A2L_zn_ribbon
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
120319943
NCBI-ProteinID:
XP_039225252
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MGVTSLWQILEPIKQHVPLCSLKGKTLAVDLSLWVCEAQAVKKMVGIVTNPHLRNIYYRV
SSLTLMGVHLVFVTEGDLPKLKTSTVKKRIEARFGPSKKPGIAKKGRSRFKSILKEASYH
SGLRLQMLNTASYQCLELLECLGMPWIQAAGEAEAMCAYLNANGYVDGCITNDGDIFLYG
AQTVYRNFTMNVKDPHVDCYLISDIEEKLGCSRESLIGLAILLGCDYLPKGVPGVGKEQV
LKLIKTLKGQSLLQRFESWKDHLQSGDVPVSTAKKPLHCSVCHHPGSYKDHKDTGCQICG
SVGYCEPQDADYCCPCDWHSSESKQQPSLEEESIKKKAMACEGFPFPEVIQEYLISKDKP
VKLNGCQRPNLLSFQRFAVKKMNWTEQYACEKLYSLLTYYDMNRKKSGYTDPKHLQALRI
IKTRIRNGIPCFEIAWQKPDHYSAATEDQPADPFLITIEESTLFEAAYPEVVALYQMEKL
KIGREKKKSKKKSKEKECLAGDSKGEGSFSDLTWQPAGENILSQGSKSDLGLVFDMQKFP
KKSCESLCLSGSADFSTALGEPSNFFFASQNTENEYKPSNSLISPTELFVKEPMASSANI
DLQLSGIDWEGTSFSISPRNVNLPWYSESESGLGNNSLKLCCPPYSKAANILTQHSDSAQ
HDPSQVTGVDYSVSNTDFPKDKYDLSLKDRATMESLEAFPKAKNVTLLNTIQLQEQIKRT
SKPGEEFSSLPNSIQEIENVMLLEKHLQGLSLENYKEDLQSSENPRTAADKVLDSGSSLR
LCTETLKVSCLENKQPILPSRSNKVLDNCQTGKKAVPRIMKSSLKKSVCQNSYHAEDSDS
ENVEGRWKGHRIPKQQRKSHMVQLKDKCNGKRDNKKLAFEIQPKAEGKDEQALKLLNTDL
STEERLPVPLCRSPSLSKCGFDPCLQETRSDLDMWLESPLPLSERLKHRLKSS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaactagcctgtggcagatcctggaacctatcaagcaacatgtccctctctgc
agtcttaaaggaaaaacattagctgttgatttaagtctctgggtgtgtgaagcacaggca
gttaagaagatggtgggaatagtcacaaacccgcatcttaggaatatttattatcgtgtc
tcttctttaacattgatgggggtccatctggtgtttgtcacggagggagatctcccaaaa
ctgaaaaccagcacagtgaagaagagaatagaagctcgctttggcccatcgaaaaagcct
gggattgcaaaaaaagggagatcccgtttcaaatctattttgaaagaggcaagctatcac
agtgggttacgcttacagatgctgaatacggccagttatcagtgccttgaactgctggag
tgcttgggaatgccatggattcaagcagctggagaagcagaggccatgtgtgcctatctg
aatgcaaatggctatgtggatgggtgcatcaccaatgatggagacatcttcctttatggc
gctcaaacagtttatcgaaattttaccatgaacgtcaaggacccacatgttgactgctac
ttgatatctgatattgaagagaaactaggctgcagcagagaatctctgatcggattagca
attctgcttggctgtgattatcttcctaagggagttcctggagtaggaaaagaacaggtt
ttaaagttgatcaaaactttaaaaggacagagtttactgcaaagatttgagtcctggaaa
gaccatttgcaatctggtgatgtcccagtatcaacagctaaaaaaccacttcactgttct
gtgtgccatcatccaggttcttataaagatcataaggacacaggatgtcagatctgtggc
agtgtaggatattgtgagccccaggatgctgactactgctgcccctgtgactggcactct
tctgagtcaaagcagcaaccaagcttagaggaggaaagtattaaaaaaaaagctatggca
tgtgaaggttttccctttcccgaggttatccaagagtatctcatcagcaaagacaaacca
gtgaaattaaatggatgccaaaggccaaatttattatcttttcaaaggtttgctgtcaag
aaaatgaactggaccgagcagtatgcctgtgagaaattgtatagtcttctgacttactat
gacatgaacagaaagaagtctggttatactgatccaaagcatctgcaggccttgcggata
atcaagacacggattagaaatggaattccctgttttgaaattgcatggcaaaagccagat
cattactctgctgcaactgaggatcagcctgcagatccctttctaataacaatagaagag
tcaactctatttgaggctgcctatcctgaagtggtcgctttgtatcaaatggagaagttg
aaaattggcagagaaaaaaagaaaagtaagaaaaaaagtaaagagaaagaatgcttagca
ggggacagcaaaggagaaggctctttttctgacctgacctggcaacctgcgggtgaaaat
attctcagccaaggttcaaaatctgatttggggcttgtttttgatatgcaaaaatttcca
aaaaagagctgtgaatctctgtgtttatcaggctctgcagatttttctactgcattagga
gagccaagcaacttcttttttgcttcacagaatacagaaaatgaatataaaccttctaat
tctttaatctcaccaacagaattatttgtgaaggagccgatggcttcttccgcaaatatc
gatctgcagctgagtggcattgactgggaagggacatccttcagcatttctccaaggaat
gttaatcttccttggtattcagaatctgagtctggcctgggcaacaattctttaaagctg
tgctgtccaccatacagtaaagcagccaatatcctcacacagcattcagattctgcacaa
catgatcccagtcaggtcactggtgtagattactctgtttcaaatacagactttcctaaa
gacaagtatgatttgtctttaaaagatcgagccacgatggaaagtttagaagctttcccc
aaagctaaaaacgtgactttgttaaacaccatacaactgcaagaacaaataaagagaact
tccaaacctggagaagaattttcgtctcttcctaacagcattcaggaaattgaaaatgtg
atgttactagaaaaacatctgcaggggctaagcttggagaactataaagaagatctccaa
agttctgagaacccacgaactgcagcagataaagtcctagattcaggaagttctttgagg
ttgtgcactgaaacgctaaaagtgagttgcttagaaaacaaacagcccattttgccatct
aggtcaaataaagtcctagataactgtcagactgggaaaaaagctgtgccaaggatcatg
aaaagctccctgaagaagagtgtgtgccaaaatagttatcatgctgaagacagcgatagt
gaaaatgtggaaggcaggtggaagggtcacaggatcccaaaacagcaaaggaagagtcat
atggttcagctgaaggacaagtgcaatggcaaaagggacaacaagaaattggcatttgaa
attcagccaaaagcagaagggaaagatgagcaggcccttaaattactcaacactgattta
tcaacagaagaacgtctgcctgtaccgctctgcaggtctccaagtctctccaaatgtgga
ttcgatccttgtcttcaggagaccagaagcgatttggacatgtggcttgagagtccactg
cctctgtcggaaaggctaaagcacagattgaagagcagttga
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