Crotalus tigris (Tiger rattlesnake): 120320223
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Entry
120320223 CDS
T08476
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120320223
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120320223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_3
Motif
Other DBs
NCBI-GeneID:
120320223
NCBI-ProteinID:
XP_039225703
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MATEYEGISPTNWKEIVNKKLKFPEGLLAAIQDGQLTKIQQMLHVSDGILRQLDETEDRA
WREALNLAIRTGGAEITKTLLRFVKFDFRQVHEALLVAVDTNQPSVVKQLLDRLDQEKGM
KMDIKSFSMAFFDNSIDNSRFAPGVTPLTLACEKDLYEIVEMLMKKGHTIPRPHKVSCAC
LECSNGRKFDLLKFSLSRINTYKGIASRAYLSIASEDPMLTAFKLSRELKWLSKKEPEFK
PDYLALENLCQEFAFELMGMCRNQSEVTAILNELGDDAVDDDEEMDDQAFEEGIPNLARL
RLAVNYNQKRFVAHPVCQQVLSSIWCGSLPSWRGSKSLWKVFVSFSIFLAMPFLALTYFF
APKSKIGKMLKIPVIKFLLHSASYVWFLVFLLVESLILEHHQEIFMERNQSMWETSLHMI
WVMGFFWFECKEVWIEGLRSYLLDWWNFLDIVILSMYLASFVLKLLVYLKGQVFCLEVQP
STPECYYYTQAKRLDWHTEDPQFMAEVLFAVTSMLSFTRLAYILPAHETLGTLQISIGKM
IDDMIRFMFIMMIILTAFLCGMNNIYVYYQQSKRLGSFNETFQFLFWTMLGMEEHDVVDM
PEFFVAELVGQVLYGIFTIVMVVVLLNMLVAMITSSFQKIENDADVEWKFARSKLYLSFF
REGLTLPVPFNIIPTPKSIFYAIRGSFRFLCCFKSKKSQKYPPINTISNPSLEEGGIRTE
GRVSYRRQVLKALVQRYIDTARRELEESRRKGEGLWGGPLGG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagtacgagggcatctcgccgaccaactggaaggagatagtcaacaagaag
ctcaagtttcccgaaggcctcctggcggccattcaagatggccagctgacgaagatccag
cagatgttgcacgtcagtgatgggatcctgcggcagctggatgaaacggaggaccgggcc
tggcgcgaggcgctcaacttggccatccgtaccggcggggcggagatcaccaagaccttg
ctacgcttcgtgaagtttgactttcggcaggtccacgaggcccttctggtggcagtggac
accaaccagcccagtgtggtcaagcagctcctggatcggcttgaccaagagaagggtatg
aagatggacatcaagtccttctctatggctttcttcgataactcgatcgacaactcccgc
ttcgcccctggggtgaccccgctcaccttggcttgtgagaaggacctctacgagatcgtg
gagatgctgatgaagaagggccacaccattcctcggccacacaaggtctcctgcgcttgc
ttggagtgctcgaacggcaggaagtttgacctgctcaagttctcgctctcccgcatcaac
acctacaaaggcatcgccagccgggcctacctctccatcgccagcgaggaccccatgttg
acggccttcaaactcagccgggagctcaaatggctctccaagaaggagccggagttcaag
ccagattacctggcgctggagaacctgtgccaggagtttgcctttgagctgatgggcatg
tgccgcaaccagagcgaggtgacggccatcctgaacgagctgggggacgatgccgtggat
gacgatgaagagatggatgaccaggcctttgaggagggcatccccaacctggccaggctc
agattggccgtcaactacaaccagaagcggtttgtggcccaccccgtctgccagcaagtc
ctctcgtccatctggtgtgggagcctgcccagctggcggggcagcaaaagcctctggaag
gtcttcgtctccttctccatcttcctggccatgcccttcctcgccctgacctacttcttc
gcccccaaatccaagatcggcaaaatgctgaagatcccagtgatcaaattcctgctgcac
tcggcctcctacgtctggttcctggtcttcctgttggtggagtccctgatcctggagcac
catcaggagatcttcatggagcgcaaccagagcatgtgggagacgtcccttcacatgatc
tgggtcatgggcttcttctggttcgagtgcaaggaggtctggatcgaagggctgcgcagc
tacctgctcgactggtggaacttcctggacatcgtcatcctgagcatgtacttggcttcc
tttgtgctcaagctgctggtctacctcaaagggcaagtcttctgcttggaggtccagcct
tcgactccggagtgctactattatacccaagctaagcggctggactggcacacggaagac
ccccagttcatggccgaggtgctctttgccgtcaccagcatgctgagcttcacccgcctg
gcctacatcctccctgcccacgagaccctggggaccctccagatctccatcgggaagatg
atcgatgacatgattcgattcatgttcatcatgatgatcatcctgacagctttcctgtgt
ggcatgaacaacatctatgtctattatcagcaatcgaagcgtctgggaagcttcaacgag
actttccagttcctcttctggaccatgctgggcatggaggagcatgacgtggttgacatg
cccgagttcttcgtggctgagctggtgggccaagtgctctacggcatcttcaccatcgtc
atggtggtcgtgctcctcaacatgctcgtcgccatgatcaccagctctttccagaagatc
gagaacgatgctgacgtagagtggaaatttgcacgctcaaaactctacctgtccttcttc
cgggaaggtttaaccttgccggttcccttcaacatcatcccgacgcccaagtccatcttc
tacgccatcaggggttcctttcgcttcctgtgctgtttcaaatcgaagaagagtcagaaa
tacccgccaatcaacaccatcagcaacccctcgctggaagaagggggcatccggaccgaa
ggccgcgtctcctatcggcgccaggtgctcaaggcgctggtgcagcgctacatcgatacg
gccaggcgggagcttgaggagagccggaggaagggtgagggtctttggggaggcccactc
ggaggctga
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