Chlamydia trachomatis B/Jali20/OT: JALI_4131
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Entry
JALI_4131 CDS
T00960
Symbol
pmpC
Name
(GenBank) polymorphic outer membrane protein
Organism
ctj
Chlamydia trachomatis B/Jali20/OT
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ChlamPMP_M
Chlam_PMP
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
CAX10867
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Position
482049..487403
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AA seq
1784 aa
AA seq
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MKFMSATAVFAAALSSVTEASSIQDQIKNTDCNVSKVGYSTSQAFTDMMLADNTEYRAAD
SVSFYDFSTSSGLPRKHLSSSSEASPTTEGVSSSSSGENTENSQDSAPSSGETDEKTEEE
LDNGGIIYAREKLTISESQDSLSNQSIELHDNSIFFGEGEVIFDHRVALKNGGAIYGEKE
VVFENIKSLLVEVNIAVEKGGSVYAKERVSLENVTEATFSSNGGEQGGGGIYSEQDMLIS
DCNNVHFQGNAAGATAVKQCLDEEMIVLLAECVDSLSEDTLDSTPETEQTESNGNQDGSS
ETEDTQVSESPESTPSPDDVLGKGGGIYTEKSLTITGITGTIDFVSNIATDSGAGVFTKE
NLSCTNTNSLQVLKNSAGQHGGGAYVTQTMSVTNTTSESITTPPLVGEVIFSENTAKGHG
GGICTNKLSLSNLKTVTLTRNSAKESGGAIFTDPTSIPITDTPESSTPSSSSPASTPEVV
ASAKINRFFASTAEPAAPSLTEAESDQTDQTETSDTNSDIDVSIENILNVAINQNTSAKK
GGAIYGKKAKLSRINNLELSGNSSQDVGGGLCLTESVEFDAIGSLLSHYNSAAKEGGAIH
SKTVTLSNLKSTFTFADNTVKAIVESTPEAPEEIPPVEGEESTATEDPNSNTEGSSANTN
LEGSQGDTADTGTGDVNNESQDTSDTGNAESGEQLQDSTQSNEENALPNSNIDQSNENTD
ESSDSYTEEITDESVSSSSESGSSTPQDGGAASSGAPSGDQSISANACLAKSYAASTDSS
PVSNSSGSEEPVTSSSDSDVTASSDNPDSSSSGDSAGNSEEPTEPEAGSTTETPTLIGGG
AIYGETVKIENFSGQGIFSGNKAIDNTTEGSSSKSDVLGGAVYAKTLFNLDSRSSRRTVT
FSGNTVSSQSTTGQVAGGAIYSPTVTIATPVVFSKNSATNNANNATDTQRKDTFGGAIGA
TSTVSLSGGAHFLENVADLGSAIGLVPGTQNTETVKLESGSYYFEKNKALKRATIYAPVV
SIKAYTATFNQNRSLEEGSAIYFTKEASIESLGSVLFTGNLVTLTLSTTTEGTPATTSGD
VTKYGAAIFGQIASSNGSQTDNLPLKLIASGGNICFRNNEYRPTSSDTGTSTFCSIAGDV
KLTMQAAKGKTISFFDAIRTSTKKTGTQATAYDTLDINKSEDSETVNSAFTGTILFSSEL
HENKSYIPQNVVLHSGSLVLKPNTELHVISFEQKEGSSLVMTPGSVLSNQTVADGALVIN
NMTIDLSSVEKNGIAEGNIFTPPELRIIDTTTSGSGGTPSTDSESNQNSDDTEEQNNNDA
SNQGESANGSSSPAVAAAHTSRTRNFAAAATATPTTTPTATTTTSNQVILGGEIKLIDPN
GTFFQNPALRSDQQISLLVLPTDSSKMQAQKIVLTGDIAPQKGYTGTLTLDPDQLQNGTI
SVLWKFDSYRQWAYVPRDNHFYANSILGSQMSMVTVKQGLLNDKMNLARFEEVSYNNLWI
SGLGTMLSQVGTPTSEEFTYYSRGASVALDAKPAHDVIVGAAFSKMIGKTKSLKRENNYT
HKGSEYSYQASVYGGKPFHFVINKKTEKSLPLSLQGVISYGYIKHDTVTHYPTIRERNKG
EWEDLGWLTALRVSSVLKTPAQGDTKRITVYGELEYSSIRQKQFTETEYDPRYFDNCTYR
NLAIPMGLAFEGELSGNDILMYNRFSVAYMPSIYRNSPTCKYQVLSSGEGGEIICGVPTR
NSARGEYSTQLYLGPLWTLYGSYTIEADAHTLAHMMNCGARMTF
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatgtcagctactgctgtatttgctgcagcactctcctccgttactgaggcg
agctcgatccaagatcaaataaagaataccgactgcaatgttagcaaagtaggatattca
acttctcaagcatttactgatatgatgctagcagacaacacagagtatcgagctgctgat
agtgtttcattctatgacttttcgacatcttccggattacctagaaaacatcttagtagt
agtagtgaagcttctccaacgacagaaggagtgtcttcatcttcatctggagaaaatact
gagaattcacaagattcagctccctcttctggagaaactgatgagaaaacagaagaagaa
ctagacaatggcggaatcatttatgctagagagaaactaactatctcagaatctcaggac
tctctctctaatcaaagcatagaactccatgacaatagtattttcttcggagaaggtgaa
gttatctttgatcacagagttgccctcaaaaacggaggagctatttatggagagaaagag
gtagtctttgaaaacataaaatctctactagtagaagtaaatatcgcggtcgagaaaggg
ggtagcgtctatgcaaaagaacgagtatctttagaaaatgttaccgaagcaaccttctcc
tccaatggtggggaacaaggtggtggtggaatctattcagaacaggatatgttaatcagt
gattgcaacaatgtacatttccaagggaatgctgcaggagcaacagcagtaaaacaatgt
ctggatgaagaaatgatcgtattgctcgcagaatgcgttgatagcttatccgaagataca
ctggatagcactccagaaacggaacagactgagtcaaatggaaatcaagacggttcgtct
gaaacagaagatacacaagtatcagaatcaccagaatcaactcctagccccgacgatgtt
ttaggtaaaggtggtggtatctatacagaaaaatctttgaccatcactggaattacaggg
actatagattttgtcagtaacatagctaccgattctggagcaggtgtattcactaaagaa
aacttgtcttgcaccaacacgaatagcctacaggttttgaaaaactcggcaggtcaacat
ggaggaggagcctacgttactcaaaccatgtctgttactaatacaactagtgaaagtata
actactccccctctcgtaggagaagtgattttctctgaaaatacagctaaagggcacggt
ggtggtatctgcactaacaaactttctttatctaatttaaaaacggtgactctcactaga
aactctgcaaaggagtctggaggagctatttttacagatccaacgtctataccaataaca
gataccccagaatcttctaccccctcttcctcctcgcctgcaagcactcctgaagtagtt
gcttctgctaaaataaatcgattctttgcctctacggcagaaccggcagccccttctcta
acagaggctgagtctgatcaaacggatcaaacagaaacttctgatactaatagcgatata
gacgtgtcgattgagaacattttgaatgtcgctatcaatcaaaacacttctgcgaaaaaa
ggaggggctatttacgggaaaaaagctaaactttcccgtattaacaatcttgaactttca
gggaattcatcccaggatgtaggaggaggtctctgtttaactgaaagcgtagaatttgat
gcaattggatcgctcttatcccactataactctgctgctaaagaaggtggggctattcat
tctaaaacggttactctatctaacctcaagtctaccttcacttttgcagataacactgtt
aaagcaatagtagaaagcactcctgaagctccagaagagattcctccagtagaaggagaa
gagtctacagcaacagaagatccgaattctaatacagaaggaagttcggctaacactaac
cttgaaggatctcaaggggatactgctgatacagggactggtgatgttaacaatgagtct
caagacacatcagatactggaaacgctgaatctggagaacaactacaagattctacacaa
tctaatgaagaaaatgcccttcccaatagtaatattgatcaatctaacgaaaacacagac
gaatcatctgatagctacactgaggaaataactgacgagagtgtctcatcgtcctctgaa
agtggatcatctactcctcaagatggaggagcagcttcttcaggggctccctcaggagat
caatctatctctgcaaacgcttgtttagctaaaagctatgctgcgagtactgatagctcc
cccgtatctaattcttcaggttcagaagagcctgtcacttcttcttcagattcagacgtt
actgcatcttctgataatccagactcttcctcatctggagatagcgctggaaactctgaa
gaaccgactgagccagaagctggttctacaacagaaactcctactttaataggaggaggt
gctatctatggagaaactgttaagattgagaacttctctggccaaggaatattttctgga
aacaaagctatcgataacaccacagaaggctcctcttccaaatctgacgtcctcggaggt
gcggtctatgctaaaacattgtttaatctcgatagcaggagctctagacgaactgtcacc
ttctccgggaatactgtctcttctcaatctacaacaggtcaggttgctggaggagctatc
tactctcctactgtaaccattgctactcctgtagtattttctaaaaactctgcaacaaac
aatgctaataacgctacagatactcagagaaaagacacctttggaggagctatcggagct
acttctactgtttctctatcaggaggggctcatttcttagaaaacgttgctgacctcgga
tctgctattgggttggtgccaggcacacaaaatacagaaacagtgaaattagagtctggc
tcctactactttgaaaaaaataaagctttaaaacgagctactatttacgcacctgtcgtt
tccattaaagcctatactgcgacatttaaccaaaacagatctctagaagaaggaagcgcg
atttactttacaaaagaagcatctattgagtctttaggctctgttctcttcacaggaaac
ttagtaaccctaacgctaagcacaactacagaaggcacaccagccacaacctcaggagat
gtaacaaaatatggtgctgctatctttggacaaatagcaagctcaaacggatctcagacg
gataaccttcccctgaaactcattgcttcaggaggaaatatttgtttccgaaacaatgaa
taccgtcctacttcttctgataccggaacctctactttctgtagtattgcgggagatgtt
aaattaaccatgcaagctgcaaaagggaaaacgatcagtttctttgatgcaatccggacc
tctactaagaaaacaggtacacaggcgactgcctacgatactctcgatattaataaatct
gaggattcagaaactgtaaactctgcgtttacaggaacgattctgttctcctctgaatta
catgaaaataaatcctatattccacaaaacgtagttctacacagtggatctcttgtattg
aagccaaataccgagcttcatgtcatttcttttgagcagaaagaaggctcttctctcgtt
atgacacctggatctgttctttcgaaccagactgttgctgatggagctttggtcataaat
aacatgaccattgatttatccagcgtagagaaaaatggtattgctgaaggaaatatcttt
actcctccagaattgagaatcatagacactactacaagtggaagcggtggaaccccatct
acagatagtgaaagtaaccagaatagtgatgataccgaggagcaaaataataatgacgcc
tcgaatcaaggagaaagcgcgaatggatcgtcttctcctgcagtagctgctgcacacaca
tctcgtacaagaaactttgccgctgcagctacagccacacctacgacaacaccaacggct
acaactacaacaagcaaccaagtaatcctaggaggagaaattaaactcatcgatcctaat
gggaccttcttccagaaccctgcattaagatccgaccaacaaatctccttgttagtgctc
cctacagactcatcaaaaatgcaagctcagaaaatagtcctgacgggtgatattgctcct
cagaaaggatatacaggaacactcactctggatcctgatcaactacaaaatggaacgatc
tcagtgctctggaaatttgactcttataggcaatgggcttatgtacctagagacaatcat
ttctatgcgaactcgattctgggatctcaaatgtcaatggtcacagtcaaacaaggcttg
ctcaacgataaaatgaatctagctcgctttgaggaagttagctataacaacctgtggata
tcaggactaggaacgatgctatcgcaagtaggaacacctacttctgaagaattcacttat
tacagcagaggagcttctgttgccttagatgctaaaccagcccatgatgtgattgttgga
gctgcatttagtaagatgatcgggaaaacaaaatccttgaaaagagagaataactacact
cacaaaggatccgaatattcttaccaagcatcggtatacggaggcaaaccattccacttt
gtaatcaataaaaaaacggaaaaatcgctaccgctatcgttacaaggagtcatctcttac
ggatatatcaaacatgatacagtgactcactatccaacgatccgtgaacgaaacaaagga
gaatgggaagacttaggatggctgacagctctccgtgtctcctctgtcttaaaaactcct
gcacaaggggatactaaacgtatcactgtttacggagaattggaatactccagtatccgt
cagaaacaattcacagaaacagaatacgatcctcgttacttcgacaactgcacctataga
aacttagcaattcctatggggttagcattcgaaggagagctctctggtaacgatattttg
atgtacaacagattctctgtagcatacatgccatcaatctatcgaaattctccaacatgc
aaataccaagtgctctcttcaggagaaggcggagaaattatttgtggagtaccgacaaga
aactcagctcgcggagaatacagcacgcagctgtacctgggacctttgtggactctgtat
ggatcctacacgatagaagcagacgcacatacactagctcatatgatgaactgcggtgct
cgtatgacattctaa
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integrated database retrieval system