Chlamydia trachomatis RC-J(s)/122: CTRC122_02180
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Entry
CTRC122_02180 CDS
T02770
Name
(GenBank) polymorphic outer membrane protein
Organism
ctjs
Chlamydia trachomatis RC-J(s)/122
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ChlamPMP_M
Chlam_PMP
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AGS00347
LinkDB
All DBs
Position
483393..488717
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AA seq
1774 aa
AA seq
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MKFLSATAVFAAVLSSVTEASSIQDQIKNTDCNVSKVGYSTSQAFTDMMLADNTEYRAAD
SVSFYDFSTSSGLPRKHLSSSSEASPTTEGVSSSSSGENTENSQDSAPSSGETDKKTEEE
LDNGGIIYAREKLTISESQDSLSNPSIELHDNSFFFGEGEVIFDHRVALKNGGAIYGEKE
VVFENIKSLLVEVNISVEKGGSVYAKERVSLENVTEATFSSNGGEQGGGGIYSEQDMLIS
DCNNVHFQGNAAGATAVKQCLDEEMIVLLTECVDSLSEDTLDSTPETEQTKSNGNQDGSS
ETKDTQVSESPESTPSPDDVLGKGGGIYTEKSLTITGITGTIDFVSNIATDSGAGVFTKE
NLSCTNTNSLQFLKNSAGQHGGGAYVTQTMSVTNTTSESITTPPLVGEVIFSENTAKGHG
GGICTNKLSLSNLKTVTLTKNSAKESGGAIFTDLASIPTTDTPESSTPSSSSPASTPEVV
ASAKINRFFASTAEPAAPSLTEAESDQTDQTETSDTNSDIDVSIENILNVAINQNTSAKK
GGAIYGKKAKLSRINNLELSGNSSQDVGGGLCLTESVEFDAIGSLLSHYNSAAKEGGVIH
SKTVTLSNLKSTFTFADNTVKAIVESTPEAPEEIPPVEGEESTATENPNSNTEGSSANTN
LEGSQGDTADTGTGVVNNESQDTSDTGNAESGEQLQDSTQSNEENTLPNSSIDQSNENTD
ESSDSHTEEITDESVSSSSKSGSSTPQDGGAASSGAPSGDQSISANACLAKSYAASTDSS
PVSNSSGSDVTASSDNPDSSSSGDSAGDSEGPTEPEAGSTTETPTLIGGGAIYGETVKIE
NFSGQGIFSGNKAIDNTTEGSSSKSNVLGGAVYAKTLFNLDSGSSRRTVTFSGNTVSSQS
TTGQVAGGAIYSPTVTIATPVVFSKNSATNNANNATDTQRKDTFGGAIGATSAVSLSGGA
HFLENVADLGSAIGLVPDTQNTETVKLESGSYYFEKNKALKRATIYAPVVSIKAYTATFN
QNRSLEEGSAIYFTKEASIESLGSVLFTGNLVTPTLSTTTEGTPATTSGDVTKYGAAIFG
QIASSNGSQTDNLPLKLIASGGNICFRNNEYRPTSSDTGTSTFCSIAGDVKLTMQAAKGK
TISFFDAIRTSTKKTGTQATAYDTLDINKSEDSETVNSAFTGTILFSSELHENKSYIPQN
VVLHSGSLVLKPNTELHVISFEQKEGSSLVMTPGSVLSNQTVADGALVINNMTIDLSSVE
KNGIAEGNIFTPPELRIIDTTTSGSGGTPSTDSESNQNSDDTKEQNNNDASNQGESANGS
SSPAVAAAHTSRTRNFAAAATATPTTTPTATTTTSNQVILGGEIKLIDPNGTFFQNPALR
SDQQISLLVLPTDSSKMQAQKIVLTGDIAPQKGYTGTLTLDPDQLQNGTISALWKFDSYR
QWAYVPRDNHFYANSILGSQMSMVTVKQGLLNDKMNLARFDEVSYNNLWISGLGTMLSQV
GTPTSEEFTYYSRGASVALDAKPAHDVIVGAAFSKMIGKTKSLKRENNYTHKGSEYSYQA
SVYGGKPFHFVINKKTEKSLPLLLQGVISYGYIKHDTVTHYPTIRERNQGEWEDLGWLTA
LRVSSVLRTPAQGDTKRITVYGELEYSSIRQKQFTETEYDPRYFDNCTYRNLAIPMGLAF
EGELSGNDILMYNRFSVAYMPSIYRNSPTCKYQVLSSGEGGEIICGVPTRNSARGEYSTQ
LYPGPLWTLYGSYTIEADAHTLAHMMNCGARMIF
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctgtcagctactgctgtatttgctgcagtactctcctccgttactgaggcg
agctcgatccaagatcaaataaagaataccgactgcaatgttagcaaagtaggatattca
acttctcaagcatttactgatatgatgctagcagacaacacagagtatcgagctgctgat
agtgtttcattctatgacttttcgacatcttccggattacctagaaaacatcttagtagt
agtagtgaagcttctccaacgacagaaggagtgtcttcatcttcatctggagaaaatact
gagaattcacaagattcagctccctcttctggagaaactgataagaaaacagaagaagaa
ctagacaatggcggaatcatttatgctagagagaaactaactatctcagaatctcaggac
tctctctctaatccaagcatagaactccatgacaatagttttttcttcggagaaggtgaa
gttatctttgatcacagagttgccctcaaaaacggaggagctatttatggagagaaagag
gtagtctttgaaaacataaaatctctactagtagaagtaaatatctcggtcgagaaaggg
ggtagcgtctatgcaaaagaacgagtatctttagaaaatgttaccgaagcaaccttctcc
tccaatggtggggaacaaggtggtggtggaatctattcagaacaagatatgttaatcagt
gattgcaacaatgtacatttccaagggaatgctgcaggagcaacagcagtaaaacaatgt
ctggatgaagaaatgatcgtattgctcacagaatgcgttgatagcttatccgaagataca
ctggatagcactccagaaacggaacagactaagtcaaatggaaatcaagatggttcgtct
gaaacaaaagatacacaagtatcagaatcaccagaatcaactcctagccccgacgatgtt
ttaggtaaaggtggtggtatctatacagaaaaatctttgaccatcactggaattacaggg
actatagattttgtcagtaacatagctaccgattctggagcaggtgtattcactaaagaa
aacttgtcttgcaccaacacgaatagcctacagtttttgaaaaactcggcaggtcaacat
ggaggaggagcctacgttactcaaaccatgtctgttactaatacaactagtgaaagtata
actactccccctctcgtaggagaagtgattttctctgaaaatacagctaaagggcacggt
ggtggtatctgcactaacaaactttctttatctaatttaaaaacggtgactctcactaaa
aactctgcaaaggagtctggaggagctatttttacagatctagcgtctataccaacaaca
gataccccagagtcttctaccccctcttcctcctcgcctgcaagcactcccgaagtagtt
gcttctgctaaaataaatcgattctttgcctctacggcagaaccggcagccccttctcta
acagaggctgagtctgatcaaacggatcaaacagaaacttctgatactaatagcgatata
gacgtgtcgattgagaacattttgaatgtcgctatcaatcaaaacacttctgcgaaaaaa
ggaggggctatttacgggaaaaaagctaaactttcccgtattaacaatcttgaactttca
gggaattcatcccaggatgtaggaggaggtctctgtttaactgaaagcgtagaatttgat
gcaattggatcgctcttatcccactataactctgctgctaaagaaggtggggttattcat
tctaaaacggttactctatctaacctcaagtctaccttcacttttgcagataacactgtt
aaagcaatagtagaaagcactcctgaagctccagaagagattcctccagtagaaggagaa
gagtctacagcaacagaaaatccgaattctaatacagaaggaagttcggctaacactaac
cttgaaggatctcaaggggatactgctgatacagggactggtgttgttaacaatgagtct
caagacacatcagatactggaaacgctgaatctggagaacaactacaagattctacacaa
tctaatgaagaaaatacccttcccaatagtagtattgatcaatctaacgaaaacacagac
gaatcatctgatagccacactgaggaaataactgacgagagtgtctcatcgtcctctaaa
agtggatcatctactcctcaagatggaggagcagcttcttcaggggctccctcaggagat
caatctatctctgcaaacgcttgtttagctaaaagctatgctgcgagtactgatagctcc
cctgtatctaattcttcaggttcagacgttactgcatcttctgataatccagactcttcc
tcatctggagatagcgctggagactctgaaggaccgactgagccagaagctggttctaca
acagaaactcctactttaataggaggaggtgctatctatggagaaactgttaagattgag
aacttctctggccaaggaatattttctggaaacaaagctatcgataacaccacagaaggc
tcctcttccaaatctaacgtcctcggaggtgcggtctatgctaaaacattgtttaatctc
gatagcgggagctctagacgaactgtcaccttctccgggaatactgtctcttctcaatct
acaacaggtcaggttgctggaggagctatctactctcctactgtaaccattgctactcct
gtagtattttctaaaaactctgcaacaaacaatgctaataacgctacagatactcagaga
aaagacacctttggaggagctatcggagctacttctgctgtttctctatcaggaggggct
catttcttagaaaacgttgctgacctcggatctgctattgggttggtgccagacacacaa
aatacagaaacagtgaaattagagtctggctcctactactttgaaaaaaataaagcttta
aaacgagctactatttacgcacctgtcgtttccattaaagcctatactgcgacatttaac
caaaacagatctctagaagaaggaagcgcgatttactttacaaaagaagcatctattgag
tctttaggctctgttctcttcacaggaaacttagtaaccccaacgctaagcacaactaca
gaaggcacaccagccacaacctcaggagatgtaacaaaatatggtgctgctatctttgga
caaatagcaagctcaaacggatctcagacggataaccttcccctgaaactcattgcttca
ggaggaaatatttgtttccgaaacaatgaataccgtcctacttcttctgataccggaacc
tctactttctgtagtattgcgggagatgttaaattaaccatgcaagctgcaaaagggaaa
acgatcagtttctttgatgcaatccggacctctactaagaaaacaggtacacaggcaact
gcctacgatactctcgatattaataaatctgaggattcagaaactgtaaactctgcgttt
acaggaacgattctgttctcctctgaattacatgaaaataaatcctatattccacaaaac
gtagttctacacagtggatctcttgtattgaagccaaataccgagcttcatgtcatttct
tttgagcagaaagaaggctcttctctcgttatgacacctggatctgttctttcgaaccag
actgttgctgatggagctttggtcataaataacatgaccattgatttatccagcgtagag
aaaaatggtattgctgaaggaaatatctttactcctccagaattgagaatcatagacact
actacaagtggaagcggtggaaccccatctacagatagtgaaagtaaccagaatagtgat
gataccaaggagcaaaataataatgacgcctcgaatcaaggagaaagcgcgaatggatcg
tcttctcctgcagtagctgctgcacacacatctcgtacaagaaactttgccgctgcagct
acagccacacctacgacaacaccaacggctacaactacaacaagcaaccaagtaatccta
ggaggagaaatcaaactcatcgatcctaatgggaccttcttccagaaccctgcattaaga
tccgaccaacaaatctccttgttagtgctccctacagactcatcaaaaatgcaagctcag
aaaatagtactgacgggtgatattgctcctcagaaaggatatacaggaacactcactctg
gatcctgatcaactacaaaatggaacgatctcagcgctctggaaatttgactcttataga
caatgggcttatgtacctagagacaatcatttctatgcgaactcgattctgggatctcaa
atgtcaatggtcacagtcaaacaaggcttgctcaacgataaaatgaatctagctcgcttt
gatgaagttagctataacaacctgtggatatcaggactaggaacgatgctatcgcaagta
ggaacacctacttctgaagaattcacttattacagcagaggagcttctgttgccttagat
gctaaaccagcccatgatgtgattgttggagctgcatttagtaagatgatcgggaaaaca
aaatccttgaaaagagagaataactacactcacaaaggatccgaatattcttaccaagca
tcggtatacggaggcaaaccattccactttgtaatcaataaaaaaacggaaaaatcgcta
ccgctattgttacaaggagtcatctcttacggatatatcaaacatgatacagtgactcac
tatccaacgatccgtgaacgaaaccaaggagaatgggaagacttaggatggctgacagct
ctccgtgtctcctctgtcttaagaactcctgcacaaggggatactaaacgtatcactgtt
tacggagaattggaatactccagtatccgtcagaaacaattcacagaaacagaatacgat
cctcgttacttcgacaactgcacctatagaaacttagcaattcctatggggttagcattc
gaaggagagctctctggtaacgatattttgatgtacaacagattctctgtagcatacatg
ccatcaatctatcgaaattctccaacatgcaaataccaagtgctctcttcaggagaaggc
ggagaaattatttgtggagtaccgacaagaaactcagctcgcggagaatacagcacgcag
ctgtacccgggacctttgtggactctgtatggatcctacacgatagaagcagacgcacat
acactagctcatatgatgaactgcggtgctcgtatgatattctaa
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integrated database retrieval system
