Chlamydia trachomatis RC-J(s)/122: CTRC122_03240
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Entry
CTRC122_03240 CDS
T02770
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctjs
Chlamydia trachomatis RC-J(s)/122
Pathway
ctjs03420
Nucleotide excision repair
ctjs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTRC122_03240
03430 Mismatch repair
CTRC122_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctjs03400
]
CTRC122_03240
Enzymes [BR:
ctjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTRC122_03240
DNA repair and recombination proteins [BR:
ctjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTRC122_03240
MMR (mismatch excision repair)
Other MMR factors
CTRC122_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
DEAD
DUF6348
Motif
Other DBs
NCBI-ProteinID:
AGS00556
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Position
690738..692642
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AA seq
634 aa
AA seq
DB search
MLTSELNAAQVTAVTAPLQPVLVLAGAGAGKTRVVTHRILYLIEESRLDPKQILAITFTN
KAANELKERVQSQCRELGYSDVPMVSTFHSLSVYILRRSIHLLDRQSNFVIYDQSDSEKL
IKQCLRKLNLDKKLCNAMQFTISQAKNRLQSPEDLDSKEYPDPTRTVYAEYQEQLRAANA
LDFDDLLFLTEKLLRTPEVQQEYANHWKALLIDEYQDTNHAQYLIAKRLAAAHNNIFVVG
DPDQSIYSWRGANISNILNFEQDYSQALVVRLEENYRSCGTILEAANALIQNNSARLEKT
LRSVKGPGDKIFCFTGKNDRDEAEQVLEEISNLHSYKDIPLSDICILYRTNFQSQSFEAA
LLKRGYPYEIIGGISFYKRREIQDILAFLRLFSNNYDMAAFERTISLKKCGIGATTLAAL
MNYAKTTALPILQACWDVLEKKSIRLTKKQQQGLFSYLTHFHQMEQLYGNCDLHEFINET
IRITDYLSILKEDPETYEDRKNNLEQLLAETQTWGKSSENLPGFLEDLALKSSADETASS
HDRLKLMTIHNSKGLEFPVVFLVGLEENLLPHANSKGMHENIEEERRLCYVGITRAQEYL
YLSRAKTRFLWGTERTMVPSRFISELPRALLKFV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcttacatccgaattaaatgcagcacaagttactgccgtcacggcgccactacaacca
gtcctggtcttagctggagctggagcagggaaaactcgagtagtcactcatcgaatcctt
tatttaatagaagaatcccggctcgatcctaaacaaattttagctattacgttcacgaac
aaagcagctaacgaactaaaagaacgtgtccaatcgcaatgtcgtgagctaggatattca
gacgtacctatggtaagcacattccatagtcttagcgtttatatcctgcgacgctctatt
catttgttagatagacagtcgaattttgttatttatgatcagagtgattctgaaaaatta
attaagcaatgcttacgcaagctgaacctcgataaaaagctttgcaatgcaatgcaattt
actatctctcaagcaaaaaatcgcttgcagagtcctgaagatctcgattccaaagaatat
ccagaccctactcgcaccgtttatgctgaataccaagaacagttacgtgctgcgaacgct
ctagatttcgatgatctgttattcctaacagaaaaactgttgcgcacacctgaagtccag
caagaatacgctaatcattggaaagccttgttgatagatgagtatcaagacaccaaccac
gcgcaatatctcattgccaaacgtcttgctgcggctcataacaatatctttgtcgttgga
gatcccgaccaatctatatattcttggagaggcgccaacatctctaatatcttaaacttt
gagcaagattattcgcaggctttagttgttcgcttagaagaaaactatcgttcttgtggg
accatcctagaagccgctaatgctctgattcaaaataattctgcacgcttagaaaaaaca
ttgcgtagtgtaaaagggcctggagataaaattttctgttttacagggaaaaatgaccgc
gatgaggcagagcaagtcttagaggaaatctctaatcttcattcctataaagatatccct
ctctctgacatttgtattttatatcgaacgaactttcagtctcaatcgttcgaagcggct
cttcttaagcgaggttatccctatgaaattataggtggcatttccttctacaagcgtaga
gaaatccaagatattcttgctttccttcgcttattttctaataactacgacatggcagcc
tttgagcgaaccattagcctgaaaaaatgcggtattggagctaccacattagccgctctt
atgaactatgccaaaacaacagccctacctatattgcaggcttgttgggacgtattagag
aaaaaatctatccgtttaactaaaaaacaacagcaagggcttttctcttatttgactcat
ttccatcaaatggagcagctatacggaaactgcgatcttcatgaattcatcaatgaaacg
atccgcatcacggattacctctccatcctcaaagaagatcctgaaacctatgaagataga
aaaaacaacttagagcaattattagcagaaacgcaaacatggggtaaaagcagtgaaaac
ttgcctggtttcctagaagatctagctctaaaaagttccgcagatgaaacagcaagttcc
catgatcgcctcaagctcatgacgatccataacagtaaagggttagagtttcctgtagtc
tttctggtaggtcttgaagaaaaccttcttcctcatgccaactcgaaaggtatgcatgaa
aatattgaagaggaacggagattgtgttacgtgggaattacccgagcacaagagtatctc
tatttatctcgagcaaaaacccgattcctttggggaacggaacgcaccatggtccccagc
agatttattagcgagcttccgagggctcttttaaaatttgtttaa
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