Chlamydia trachomatis L2b/UCH-1/proctitis: CTLon_0178
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Entry
CTLon_0178 CDS
T00646
Symbol
cafE
Name
(GenBank) ribonuclease E
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ctl
Chlamydia trachomatis L2b/UCH-1/proctitis
Brite
KEGG Orthology (KO) [BR:
ctl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctl03019
]
CTLon_0178 (cafE)
03009 Ribosome biogenesis [BR:
ctl03009
]
CTLon_0178 (cafE)
Messenger RNA biogenesis [BR:
ctl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CTLon_0178 (cafE)
Ribosome biogenesis [BR:
ctl03009
]
Prokaryotic type
rRNA processing factors
CTLon_0178 (cafE)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CAP06576
UniProt:
A0A6H2W108
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All DBs
Position
complement(226307..227845)
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AA seq
512 aa
AA seq
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MENDILLNIESKEIRYAHLKNGQLFDLIIERKKIRQLKGNIYRGRVTNILRNIQSAFINI
DERENGFIHISDVLENSKKFEQMFDIDSDADHAEPRPEETSEAPIEELLKLDSPVLVQVV
KEPIGTKGARLTSNISIPGRYLVLLPNSPHRGVSRKIEDPLMRDQLKQLIRSFEMPQNMG
LICRTASISASTETLINEAQDLLNTWQSILEKFYSPDHPSLLYEETDILKKAVMTCVDKS
YKRLLIDDYATYQKCKRLLGKYSPDTTVKIEYYRDSVPMFERFNIEKEIDRATKRKIWLS
SGGYLFFDKTEAMHTIDVNSGRSTQLENGVEETLVQINLEAAEEIARQLRLRNIGGLVII
DFIDMKSRKNQRRVLERLKEHMKYDAARCTILSMSEFGLVEMTRQRNRESLMQTLFTTCP
YCNGNAIIKTSESILIEIERDLKKIIKHKEHTNLCLVVHPEIAHYMKQEQDDVELIRLAK
QLKAKLQINTSDSIHLNHYQFFSLITGEGIEL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgatatcttactaaatatagagtctaaagagattcgttacgcgcatttaaaa
aatggccaattgtttgatttgatcattgaaagaaaaaaaattcgccagttaaaagggaac
atatatagaggtcgcgtaactaacattttacgaaacattcaatccgctttcattaacata
gatgagcgggagaatggctttattcatatctcggacgtattagagaattctaaaaaattc
gaacagatgttcgatatagattctgatgcagatcacgcagaaccccggccagaagaaacc
tccgaagctcctatagaagagctactcaaacttgacagtcccgtacttgttcaggtagtg
aaggaacctatagggacgaaaggagctcgactcacttctaatatttcaatccctggacgc
tacttagtccttctaccgaattcccctcaccgaggtgtttctcgtaagattgaagaccct
ctgatgcgagatcaactcaaacagttaattcgctcttttgaaatgccccaaaatatgggt
cttatctgtcggactgcgagtatctccgcttcaacagagactctaattaacgaggctcag
gatctcttgaatacttggcaaagtatcctagagaaattttattctccagatcatccttct
cttctctacgaagagacagatattctgaaaaaagctgtgatgacttgtgtagataagagc
tacaagcgtttgttaatagacgattacgcgacctatcaaaaatgcaaacgcttattgggt
aaatattctccagacacgacggtaaagattgagtattatcgcgattcggttccaatgttc
gaacgctttaatattgagaaagaaatcgatcgcgctaccaagagaaaaatctggctgtct
agcggaggatatctcttctttgacaaaacagaagctatgcacacgatcgatgtgaactct
ggacgtagcacacagctggaaaatggagtcgaagagactctagtgcaaattaacttagaa
gccgcagaagaaattgctagacaactgcgtctaagaaatattggcggacttgtgatcata
gattttatcgatatgaaatcacgcaagaatcagcgtcgtgttttggaaagattaaaagag
cacatgaaatatgatgctgcgcgctgtacaatcttgagcatgagtgaatttgggctagta
gaaatgactcgccagagaaatcgtgagtcactaatgcagaccctatttaccacctgtcca
tattgtaatgggaacgcgatcatcaaaacctctgaaagtatcctcatagaaattgagcgt
gacctgaagaaaattattaaacacaaagagcacacgaacttgtgtttggtcgttcatccg
gaaatcgcccactatatgaaacaagagcaggacgatgtcgaactcattcgcttggctaag
caattgaaagctaagctacaaatcaatacgtccgattctatccatcttaaccactaccaa
tttttctcattgattacaggagaaggaattgagttataa
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