Chlamydia trachomatis L2b/Canada1: L2BCAN1_00428
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Entry
L2BCAN1_00428 CDS
T02567
Name
(GenBank) chlamydial polymorphic outer membrane protein repeat
Organism
ctlc
Chlamydia trachomatis L2b/Canada1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ChlamPMP_M
Chlam_PMP
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
CCP92294
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All DBs
Position
471167..476416
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AA seq
1749 aa
AA seq
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MKWLSATAVFAAVLPSVSGFCFPEPKELNFSRVGTSSSTTFTETVGEAGAEYIVSSNASF
TKFTNIPTTNTTTPTNSNSSSSNRETASVSKDSDSTTTTPDPKGGGAFYNAHSGVLSFMT
RSGTEGSLTLSEIKMTGEGGAIFSQGELLFTDLTGLTIQNNLSQLSGGAIFGGSTISLSG
ITKATFSSNSAEVPAPVKKPTKPEAQTAGETSGSSSSSGNDSVSSSSSSKAEPAAANLQS
HFICATATPAAQTDTETSTPSHKPGSGGAIYAKGDLTIADSQKVLFSINKATKDGGAIFA
EKDVSFENITSLKVQTNGAEEKGGAIYAKGDLSIQSSKQSLFNSNYSKQGGGALYVEGNI
NFQDLEEIRIKYNKAGTFKTKKITLPSKAQASAGNADAWASSSPQSSSGATTVSDSGDSS
SGSNSDTSKTVPVTAKGGGLYTDKNLSITNITGIIEIANNKATDVGGGAYVKGTLTCENS
HRLQFLKNSSDKQGGGIYGEDNITLSNLTGKTLFQENTAKKEGGGLFIKGTDKALTMTGL
DSFCLINNTSEKHGGGAFVTKEISQTYTSDVETIPGITPVHGETVITGNKSTGGNGGGVC
TKRLALSNLQSISISGNSAAENGGGAYTCPDSFPTADTAEQPAAASAATSTPESDPVAST
ALSTPSSSTVSSLTLLAASSQASPATSNEKTQDPNADTDLLIDYVVDTTISKNTAKKGGG
IYAKKAKMSRIDQLNISENSATEIGGGICCKKSLKLDALVSLSVTENLVGKEGGGLHAKT
VNISNLKSGFSFSNNKANSSSTGVATTASAPAAAAASLQAAAAAAPSSSATPTYSGVVGG
AIYGEQVTFSQCSGTCQFSGNQAIDNNPSQSSLNVQGGAIYAKTSLSIRSSDAGTSYIFS
GNSVSTGKSQTTGQIAGGAIYSPTVTLNCPATFSNNTASMATPKTSSSSGNSIKDTIGGA
IAGTAITLSGVSRFSGNTADLGAAIGTLANANTPRATSGSQNSITEKITLKNSSFIFERN
QANKRGAIYSPSVSIKGNNITFNQNTSTHDGSAIYFTKDAKIESLGSVLFTGNKVTATQA
SSATSGQNTNTANYGAAIFGDPGTTQSPQTDAILTLLASSGNITFSNNSLQNNQGGTPAS
KFCSIAGYVKLSLQATKGKTISFFDCVHTSTKKTGSTQNVYETLDINKKENSKPYTGTIV
FSSELHENKSYIPQNAILHNGTLVLKEKTELHVVSFEQKEGSKLIMEPGAVLSNQNIANG
ALAINGLTIDLSSMGTPQAGEIFSPPELRIVATTSSASGRSGVSRSIPTNPKGISAAAPS
GSAATTPTMSENKVFLTGDLTLIDPNGNFYQNPMLGSDLDVPLIKLPTNTSDVQVYDLTL
SGDLFPQKGYMGTWTLNSNPQTGKLQARWTFDTYRRWVYIPRDNHFYANSILGSQNSMIV
VKQGLINNMLNNARFDDIAYNNFWVSGVGTFLAQQGTPLSEEFSYYSRGTSVAIDAKPRQ
DFILGAAFSKMVGKTKAIKKMHNYFHKGSEYSYQASVYGGKFLYFLLNKQHGWALPFLIQ
GVVSYGHIKHDTTILYPSIHERNKGDWEDLGWLADLRISMDLKEPSKDSSKRITVYGELE
YSSIRQKQFTEIDYDPRHFDDCAYRNLSLPVGCAVEGAIMNCNILMYNKLALAYMPSIYR
NNPVCKYRVLSSNEAGQVICGVPTRTSARAEYSTQLYLGPFWTLYGNYTIDVGMYTLSQM
TSCGARMIF
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggctgtcagctactgcggtgtttgctgctgttctcccctcagtttcagggttt
tgcttcccagaacctaaagaattaaatttctctcgcgtaggaacttcttcctctaccact
tttactgaaacagttggagaagctggggcagaatatatcgtctctagtaacgcatctttc
acaaaatttaccaacattcctactaccaatacaacaactcccacgaactcaaactcctct
agctctaacagagagactgcttccgtttctaaggatagtgactctacaacaacgactcct
gatcctaaaggtggcggcgccttttataacgcgcactccggagttttgtcctttatgaca
cgatcaggaacagaaggttccttaactctgtctgagataaaaatgactggtgaaggcggt
gctatcttctctcaaggagagctgctatttacagatctgacaggtctaaccatccaaaat
aacttatcccagctatccggaggagcgatttttggaggatctacaatctccctatcaggg
attactaaagcgactttctcctccaactctgcagaagttcctgctcctgttaagaaacct
acaaaacctgaagctcaaacagcaggcgaaacgtcgggttctagtagttctagcggaaat
gattcggtgtcttcctccagttccagtaaagctgaacccgcagcagctaatcttcaaagt
cactttatttgtgctacagctactcctgctgctcaaaccgatacagaaacatcaactccc
tctcataagccaggatctgggggagctatctatgctaaaggcgaccttactatcgcagac
tctcaaaaggtactattctcaataaataaagctactaaagatggaggagcgatctttgct
gagaaagatgtttctttcgagaatattacatcattaaaagtacaaactaacggtgctgaa
gaaaagggaggagctatctatgctaaaggtgacctctcaattcaatcttctaaacagagt
ctttttaattctaactacagtaaacaaggtggtggggctctatatgttgaaggaaatata
aacttccaagatcttgaagaaattcgcattaagtacaataaagctggaacgttcaaaaca
aaaaaaatcactttaccttcaaaagctcaagcatctgcaggaaatgcagatgcttgggcc
tcttcctctcctcaatctagttctggagcaactacagtctccgactcaggagactctagc
tctggctcaaactcggatacctcaaaaacagttccagtcacagctaaaggcggtgggctt
tatactgataagaatctttcgattactaacatcacaggaattatcgaaattgcaaataac
aaagcgacagatgttggaggtggtgcttacgtaaaaggaacccttacttgtgaaaactct
caccgtctacaatttttgaaaaactcttccgataaacaaggtggaggaatctacggagaa
gacaacatcaccctatctaatttgacagggaagactctattccaagagaatactgccaaa
aaagagggcggtggactcttcataaaaggtacagataaagctcttacaatgacaggactg
gatagtttctgtttaattaataacacatcagaaaaacatggtggtggcgcctttgttacc
aaagaaatctctcagacttacacctctgatgtggaaacaattccaggaatcacgcctgta
catggtgaaacagtcattactggcaataaatctacaggaggtaatggtggaggcgtgtgt
acaaaacgtcttgccttatctaaccttcaaagcatttctatatccgggaattctgcagca
gaaaatggtggtggagcctacacatgcccagatagcttcccaacggcggatactgcagaa
cagcccgcagcagcttctgccgcgacatctactcccgagtctgacccagtggcctcaact
gctctaagcacaccttcatcttctaccgtctcttcattaaccttactagcagcctcttca
caagcctctcctgcaacctctaatgagaaaactcaagatcctaatgctgatacagactta
ttgatcgattatgtagttgatacgactatcagcaaaaacactgctaagaaaggcggtgga
atctatgctaaaaaagccaagatgtcccgcatagaccaactgaatatctctgagaactcc
gctacagagataggtggaggtatctgctgtaaaaaatctttaaaactagatgctctagtc
tccttatctgtaacagagaaccttgttgggaaagaaggtggaggcttacatgctaaaact
gtaaatatttctaatctgaaatcaggcttctctttctcgaacaacaaagcaaactcctca
tccacaggagtcgcaacaacagcttcagcacctgctgcagctgctgcttccctacaagca
gccgcagcagccgcaccatcatcttcagcaacaccaacttattcaggtgtagtaggagga
gctatctatggagaacaggttacattctctcaatgtagcgggacttgtcagttctctggg
aaccaagctatcgataacaatccctcccaatcatcgttgaacgtacaaggaggagccatc
tatgccaaaacctctttgtctattagatcttccgatgctggaacctcctatattttctcg
gggaacagtgtctccactgggaaatctcaaacaacagggcaaatagcgggaggagcgatc
tactcccctactgttacattgaattgtcctgcgacattctctaacaatacagcctctatg
gctacaccgaagacttcttcatcctcaggaaattctattaaagataccattggaggagcc
attgcagggacagccattaccctatctggagtctctcgattttcagggaatacggctgat
ttaggagctgcaataggaactctagctaatgcaaatacacccagagcaactagcggatct
caaaatagcattacagaaaaaattactttaaaaaacagttcttttatttttgaaagaaac
caagctaataaacgtggagcgatttactctcctagcgtttccattaaagggaataatatt
accttcaatcaaaatacatccactcatgatggaagcgctatctactttacaaaagatgct
aagattgagtctttaggatctgttctttttacaggaaataaagttacagctacacaagct
agttctgcaacatctggacaaaatacaaatactgccaactatggggcagctatctttgga
gatccaggaaccactcaatcgcctcaaacagatgccattttaacccttcttgcttcttct
ggaaacattacttttagcaacaacagtttacagaataaccaaggtggtactcccgctagc
aagttttgtagtattgcaggatacgtcaaactctctttacaagccactaaagggaagact
attagctttttcgattgtgtgcacacctctaccaaaaaaacaggttcaacacaaaacgtt
tatgaaactttagatattaataaaaaagagaacagtaagccatatacaggaactattgtg
ttctcttctgaattacatgaaaacaaatcttacatcccacagaatgcaatccttcacaac
ggaactttagttcttaaagagaaaacagaactccacgtagtctcttttgagcagaaagaa
gggtctaaattaattatggaacccggagctgtgttatctaaccaaaacatagctaacgga
gctctagctatcaatgggttaacgattgatctttccagtatggggactcctcaagcaggg
gaaatcttctctcctccagaattacgtatcgttgccacgacctctagtgcatccggaaga
agcggggtcagcaggagtataccaacaaatcctaaagggatttctgcagcagcgccttca
ggttctgccgcaactactccaactatgagcgagaacaaagttttcctaacaggagacctt
actttaatagatcctaatggaaacttttatcaaaaccctatgttaggaagcgatctagat
gtaccactaattaagcttccgactaacacaagtgacgtccaagtctatgatttaacttta
tctggggatcttttccctcagaaagggtacatgggaacctggacattaaattctaatcca
caaacagggaaacttcaagccagatggacattcgatacctatcgtcgctgggtatacata
cctagggataatcatttttatgcgaactctatcttaggctcccaaaactcaatgattgtt
gtgaagcaagggcttatcaacaacatgttgaataatgcccgcttcgatgatatcgcttac
aataacttctgggtttcaggagtaggaactttcttagctcaacaaggaactcctctttcc
gaagaattcagttactacagccgcggaacttcagttgccatcgatgccaaacctagacaa
gattttatcctaggagctgcatttagtaagatggtggggaaaaccaaagccatcaaaaaa
atgcataattacttccataagggctctgagtactcttaccaagcttctgtctatggaggt
aaattcctgtatttcttgctcaataagcaacatggttgggcacttcctttcctaatacaa
ggagtcgtgtcctatggacatattaaacatgatacaacaatactttacccttctatccat
gaaagaaataaaggagattgggaagatttaggatggttagcggatcttcgtatctctatg
gatcttaaagaaccttctaaagattcttctaaacggatcactgtctatggggaactcgag
tattccagcattcgccagaaacagttcacagaaatcgattacgatccaagacacttcgat
gattgtgcttacagaaatctgtcgcttcctgtgggatgcgctgtcgaaggagctatcatg
aactgtaatattcttatgtataataagcttgcattagcctacatgccttctatctacaga
aataatcctgtctgtaaatatcgggtattgtcttcgaatgaagctggtcaagttatctgc
ggagtgccaactagaacctctgctagagcagaatacagtactcaactatatcttggtccc
ttctggactctctacggaaactatactatcgatgtaggcatgtatacgctatcgcaaatg
actagctgcggtgctcgcatgatcttctaa
DBGET
integrated database retrieval system
