Chlamydia trachomatis L2b/Ams5: L2BAMS5_00516
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Entry
L2BAMS5_00516 CDS
T02577
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
ctlz
Chlamydia trachomatis L2b/Ams5
Pathway
ctlz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctlz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L2BAMS5_00516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctlz03021
]
L2BAMS5_00516
03019 Messenger RNA biogenesis [BR:
ctlz03019
]
L2BAMS5_00516
Transcription machinery [BR:
ctlz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
L2BAMS5_00516
Messenger RNA biogenesis [BR:
ctlz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L2BAMS5_00516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
S1CSD-TOTE-2
AAA_22
OB_RNB
Mor
AAA
NACHT
DUF5855
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
CCP94162
LinkDB
All DBs
Position
complement(563557..564951)
Genome browser
AA seq
464 aa
AA seq
DB search
MKEESPAEVLQKVKEHKRREGPLSLEKEVSEDSAVATEEKETSQPVAVTKIAKLQRMGIN
ELNVLARQYGVKNVGSLTKSQVVFEIVKAKSERPDEFLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIVGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLHPNERLIMEIGKENLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDAELIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPDRHIQVTEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRHLSDRRIYPAIDLIKSGTRKEELLYHP
GELEKVRLFRQAIAGLTAIDAMHLLLGRLKKTNSNTEFLLSLKD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagagagtccagccgaggtcttacaaaaggtaaaggagcacaagaggcgcgag
ggccctttatcgttggaaaaagaagttagtgaagacagtgctgttgctacagaagagaaa
gaaacctcgcaaccagtagcagttacgaagattgctaaactacagcgcatgggcattaat
gagctgaatgttttagctcggcaatatggagttaagaatgtaggttctctgacgaaatcg
caggtagtgttcgaaatcgttaaggctaaatctgaacgtcctgatgaattcttgattgga
gaaggtgtcctggaggttctcccggatggttttggatttcttaggtctcccacttacaac
tatcttccttccgcagaagatatctatgtttctcctgcgcagatccgtcgtttcgatttg
aaaaaaggagataccatcgttgggacgatccgttctcctaaggaaaaagagaaatatttt
gcgctgttgaaagtggataagattaatggctcaacgcctgataaggcaaaagagcgtgtt
ttattcgagaacctaacgcctcttcatcctaatgaacgattgatcatggagatagggaaa
gagaatttagcagagcgagtattagatttaacagctccaatcggtaagggacaacgagga
ttgatcgttgcgcctcctcgctcaggtaagacggtaatcttgcaaagcattgcacatgct
attgctgtgaataatcctgacgcagagctgattgttttgctaattgatgagcgtcctgaa
gaggtgacggatatgattcgtcaggttcgaggggaggtcgtcgcctcgacatttgatgaa
caaccggatcgacacattcaggttactgaaatggtgatcgaaaaggcaagacgtttggtc
gaacacggtaaggatgttgtgattctattagattcgattacgcgtctagctcgtgcatac
aatactgtgcagccgcattcagggaagatcctcactgggggagtagacgctagcgcgtta
cataaacctaagcgtttcttcggtgcagctagaaatattgaaggcggaggatcgttaact
atcttggccacagcgttgattgatacaggatcaagaatggacgaagtgatctttgaggaa
ttcaaaggaactgggaatatggagttggttcttgaccgccatctttctgatcgcagaatc
tatccggctatcgatttgattaagagtggaacacgaaaagaagaattgttgtaccaccct
ggagagcttgagaaagttcggttgttccgacaagctatagctggtttaacagcaatagat
gctatgcatttactgctaggccgtttgaaaaagacaaatagcaatacagaattcctgtta
tccttgaaggattaa
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