Chloracidobacterium thermophilum: Cabther_A0120
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Entry
Cabther_A0120 CDS
T01629
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
ctm
Chloracidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctm03032
]
Cabther_A0120
03036 Chromosome and associated proteins [BR:
ctm03036
]
Cabther_A0120
03400 DNA repair and recombination proteins [BR:
ctm03400
]
Cabther_A0120
DNA replication proteins [BR:
ctm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Cabther_A0120
Chromosome and associated proteins [BR:
ctm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Cabther_A0120
DNA repair and recombination proteins [BR:
ctm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Cabther_A0120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AEP10895
UniProt:
G2LGD5
LinkDB
All DBs
Position
1:149962..150252
Genome browser
AA seq
96 aa
AA seq
DB search
MTKADLVEVVARAADLTKKDAEVVVEEVFAAIIESLNRGEKIELRGFGSFRIRQRNPRRG
RNPKTGDAVDIPAKAVPYFKPGKELRELINQRMPSA
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagccgacctggtggaagtggtggcgcgggctgccgacttgacgaaaaaggat
gccgaagtcgtcgttgaagaggtcttcgcagccatcattgagtccctgaatcgcggtgaa
aagatcgaattgcgcggtttcggctcatttcgtatccgccagcgtaacccacgccgtggg
cgcaatcccaagaccggcgacgccgtggacatcccggccaaggcggtgccctatttcaag
ccgggcaaggagttacgggaactcatcaaccagcggatgccctcggcctga
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integrated database retrieval system
