Chloracidobacterium thermophilum: Cabther_A0122
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Entry
Cabther_A0122 CDS
T01629
Name
(GenBank) PAS domain S-box
Organism
ctm
Chloracidobacterium thermophilum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_4
PAS_9
PAS
GAF
GAF_2
Fez1
PAS_8
DUF2999
Filament
HOOK
Motif
Other DBs
NCBI-ProteinID:
AEP10897
UniProt:
G2LGD7
LinkDB
All DBs
Position
1:150909..154070
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AA seq
1053 aa
AA seq
DB search
MREILEPIAHQLQNPQDLDRVLSAVVQRAAESVTAVCARLWLIRRGDICQTCQWAADCPD
KRRCLHLKANFGVPVEAAYRRAPLVVLSGEQLARGGVVAWAPPPSTAAMLLDPRLADEQG
VVSFIAHPLRVENRVLGLLAVFGARMFTVADFEACAIQAAAASTAIRVAELVNRVQRADT
TVRDKSRELEQQSRLLTAILTHSTDRAILIEDLDGNILAFNEGARRAYGYGPEEVIGRAT
ADKLHAPEDWRSGHVSRIYQQALEQGAYVGEIRRQHQDGHIFVEHTTLTALRDEEGDPAG
FLSLAPVGPEPSRAAASEGILEALEELATIRRPENIVSETLLQMCRLSASPAAALLTLEG
SALGVRAVHSEAAFVPGLVGRKWSLGDVPELFRALEQGQVEPLGVSADRLLADASAGGLA
VPMLRQQVQSVVVLVAPQRKDAGPLLQLAKLAAAFLKWQLLAEQLEAREQALVTEEATRN
ARHEQLAQAYEQLAESHQAALAKVAELEAGRQKLQQSLQAATDAQRTAEAQIAELAAKLA
GAEAEQARLMEACRQSDVLAEQARQVAAEAAARCETLVARQEAALRERDLFRARVELLEA
DLRQTRQHAERATHQHAEALVHIHELEEKLAARTQDLETAEQALVELQERYEASHHQMTE
RIAQLEDLLAEAQQSIATHSAEAERLTAQVRELTEEVAAAQQARLDAQHAVETLRHDLDT
TQQLLEEAVVRSQTAEHRAAELEERTATLLSEVIAVQEEQARLISECEGLESALSTAKAE
VERQAQAIALFENHIDTLERSLATSEVARAALIQRVETLLEERTVWRQTLDHLEARLAER
QAVAQAAVSAPHVTGESTSVALPLAEGEVARLRERLAQREAENASLRQRLSLLQGTYRET
VAVLQSRLDDLAKLNAITGAHRKLEDVLFETSPPSSTAPVVVVACDDADLRARLAAWCQQ
AGYQTRQVMDSDATLATLMLDPPQSIVLAGTPTHISDAYRRIRRNPDWRTLPIVVITPES
FAGISASPSTLTLDQQAISPASLQKALRRWSAA
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattctcgaaccgatcgcccatcaactccagaatccccaggacctcgaccgc
gtgttgtcggcagtagtacaacgggcagccgaaagcgtaacggccgtgtgcgcgcgcctg
tggctgattcggcggggggatatatgccagacctgccagtgggcagcggactgtcccgac
aagcggcgctgcctgcacctgaaggcaaacttcggggttcccgtcgaagctgcttaccgg
cgtgcgcccctggttgtgctttcaggggagcagttggcacgtggtggcgtggtagcctgg
gcaccgccgccttcaaccgccgcgatgttgctggacccccggctggccgatgagcaggga
gtggtgtcgttcatcgcccatccgttgcgcgtcgaaaaccgtgtgctggggctgctggcc
gttttcggggcgcggatgtttacagttgcagactttgaagcctgcgccatccaggcggca
gccgcctcgacggccatccgggttgccgaactggtcaaccgcgtacagcgggctgacacc
actgtgcgtgacaagtcccgcgagttggagcagcagagccgcctgctgaccgccattctc
acccactcgacggaccgcgccattcttattgaggacctggacggcaacattctggcgttc
aacgagggggcacgccgtgcctatggctatggccccgaagaggtcatcgggcgcgccacc
gccgacaaactccacgcgccagaggactggcgcagcggccacgtcagcaggatttaccag
caggcactggaacagggggcgtatgtcggagaaatccgccggcagcaccaggatggacac
atctttgtcgaacacacgacattgactgcactccgggacgaggaaggtgatccggccggg
ttcctctcccttgcgccggtgggccctgagccgtcccgtgcggcggcttcggagggcatc
ctggaggcgcttgaagaactcgccaccatccggcgaccggaaaacattgtgtcagaaacc
ctgttgcagatgtgccggttgagtgcgtctccggcggctgccctgctgactttggaagga
agcgccctgggggtgcgcgctgtccacagtgaggcggcctttgtgcccgggctggttggc
cggaaatggtctctgggggatgtcccggagctgtttcgcgctctggagcaggggcaggtt
gagccgcttggtgtctcggccgaccggttgttggcggatgcctctgctggcggtttggcc
gtcccgatgctgcggcagcaggtgcagtccgtggtggtgcttgtcgctccacagcggaag
gatgccggaccactgctccagttggccaaactggcggcggcatttctcaaatggcagctt
ctggctgagcaactcgaagcacgtgaacaggcgttggtcacggaagaagccacccgcaat
gcccggcatgaacaactggcacaggcgtatgaacagcttgctgagtcccaccaggccgcc
ctggccaaggtggccgaactcgaagccgggcggcagaagctccagcagtccctgcaggcg
gcgacggatgcccaacgtacggctgaggcgcagatcgccgagttggcggcaaagctggcc
ggggccgaggccgaacaggcacgtctgatggaagcctgccgtcagtcagacgttttggct
gagcaggcgcgccaggtggcggccgaagcggcggcccgctgtgaaaccctggtagccagg
caggaagctgctcttcgggagcgggacctttttcgggcacgggttgagctgctggaagct
gatttacgccagacacgccagcacgccgagcgcgccacccaccagcacgctgaagccctg
gttcacatccacgagctggaagagaagctggctgcccgcacccaggacctggaaactgct
gagcaagccctggtcgagctgcaggagcggtatgaagcgtcccatcaccagatgacagaa
cggatcgcccaacttgaggacctgctcgctgaagcccagcaatccatagcgacacacagc
gcggaagccgaacgcctcacggctcaggtccgcgagttgacggaggaagttgccgctgca
cagcaggcacgccttgatgcccagcacgcggttgagaccctgcgccacgacctggatacc
acccagcagttgcttgaagaagccgttgtgcgcagtcaaacggccgaacacagagcggcg
gaactggaagaacgtaccgccacactcctttccgaagtgattgctgttcaggaggaacag
gcccggcttatcagcgagtgcgaggggctggaaagcgcgttgtccacggccaaagccgag
gttgagcggcaagctcaggccattgctctgtttgaaaaccatattgatacgctcgaacgc
tcactggcaacgagcgaggtggcccgtgccgcacttatccagcgggtggaaacactgctt
gaggagcggacggtatggcgacagaccctcgatcatctggaagcacgtttggccgaacgc
caagccgtggcacaggcggctgtttccgctcctcatgtgaccggcgaaagcacgtccgtg
gcactgcccctggccgagggcgaagtggcgcggctgcgggaacggctggcccagcgtgag
gcggaaaatgcctcgctgcgccagcggctgtccctgctgcagggcacctaccgggaaacc
gtcgccgtgttgcagtcccgcctcgacgatctcgccaaactcaatgccatcaccggagca
caccgcaaacttgaagatgtgctgtttgagacttctccaccgtcttcaacggcgccggtc
gtggtagtggcctgtgacgacgccgacctgcgcgcccggttggccgcctggtgtcagcag
gctggctaccagacaaggcaggtcatggacagtgacgccacactggcgacactgatgctg
gacccgccgcagagcatcgtgctggccgggacgccaacccacatcagcgatgcctaccgc
cgcatccggcggaatcccgattggcgcaccctcccgatcgtcgttatcacaccggagtcc
tttgccggcatctcggcttccccctcgaccctgacccttgaccagcaggcgatttcaccg
gcgtccctccagaaggcacttcggcgatggtcggcagcgtag
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