Chloracidobacterium thermophilum: Cabther_A0546
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Entry
Cabther_A0546 CDS
T01629
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ctm
Chloracidobacterium thermophilum
Pathway
ctm03030
DNA replication
ctm03430
Mismatch repair
ctm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cabther_A0546
03430 Mismatch repair
Cabther_A0546
03440 Homologous recombination
Cabther_A0546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctm03032
]
Cabther_A0546
03400 DNA repair and recombination proteins [BR:
ctm03400
]
Cabther_A0546
Enzymes [BR:
ctm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cabther_A0546
DNA replication proteins [BR:
ctm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cabther_A0546
DNA repair and recombination proteins [BR:
ctm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cabther_A0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEP11304
UniProt:
G2LE84
LinkDB
All DBs
Position
1:647024..647890
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AA seq
288 aa
AA seq
DB search
MPDVPPGPSFLLRTLRARLSAARGVVSLTELGRELLRAPRAAPELVRRVLLPVLAQLPEA
VLEGDDGLRWQPLPTAALEATASLPECRFAVVDVETTGRRAEQERITEVACVTIERGRIT
ETFASLVNPGVPIPPLITALTGISDELVATAPPFAAIAAEMRQRLSQTVFVAHHASFDRK
FLTAELRRADETFVWTAPTLCTVQLARYLVPGLDNYRLDTVTAHFRISNPARHRASGDAL
ATAQLFLRLLERLIEQDIVAVDAVTALLAKQKRTTRRRPLPGEDRHHE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgttccgcccggcccttcgtttctgctgagaaccctgcgcgcccggttgtcg
gcagcccgtggggtggtgtcgctgactgagctggggcgcgagttgctccgggcaccacgg
gccgcaccggaactcgtgcggcgggtgctgttgccggtgctggcccagttgccggaggct
gtgctggaaggggacgacggtctgcgctggcaaccgctgccgaccgcggccctggaagcg
acggcctcgctgccggaatgtcggtttgccgtcgtggatgtggagacgaccggacgccgc
gccgagcaggagcgcatcaccgaagtggcctgtgtcaccatcgagcgcggccggatcacc
gaaacctttgcgagtctggtcaatcccggtgtgcccattccgccgctgattacggccctg
accggtatcagcgacgaactcgtggccacagcgccaccctttgcggccattgccgctgaa
atgcggcagcggctgagccagacggttttcgttgcgcaccatgccagcttcgaccgtaaa
tttctgacggctgaactcaggcgcgccgatgaaacctttgtgtggacggcgcccacgttg
tgtacggtacaactggcgcgctatctcgttcccggtctggacaactaccggctcgatacc
gtcaccgctcattttcggatttccaatccggcccggcaccgcgcatcgggagacgccctt
gcgacggcccagcttttcctgcgattgttggaacggctgattgaacaggacatcgtagcg
gttgacgctgtgactgcccttctggcaaagcaaaagcgaacaaccagacggcggccattg
cccggcgaggacagacaccatgaatga
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