Chloracidobacterium thermophilum: Cabther_A0623
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Entry
Cabther_A0623 CDS
T01629
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ctm
Chloracidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctm03021
]
Cabther_A0623
03009 Ribosome biogenesis [BR:
ctm03009
]
Cabther_A0623
Transcription machinery [BR:
ctm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Cabther_A0623
Ribosome biogenesis [BR:
ctm03009
]
Prokaryotic type
rRNA transcription factors
Cabther_A0623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
S1
HHH_5
KH_2
KH_NusA_C
DUF4332
TfoX_C
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AEP11380
UniProt:
G2LFH9
LinkDB
All DBs
Position
1:complement(730988..732490)
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AA seq
500 aa
AA seq
DB search
MSILSEQIQAISRDKNIDPRIIIEALQDAVTAAARRHFKSNENLVAIYSEESHRMELYAA
KRVTDVVVCPETEVSLEEALQADASAEIGDVLYEPRQDRFEELGRIAAQTAKQIIIQKVR
EAERENIYNEYIGRVGEIVHGVVKRFERGNIILDIGRTEALLPRSEQSPAENFSQNDRVR
VVITQVTKDAKGPQVHVSRTSPELLKRLFEMEVPEIYDGTVTIKAAAREPGERAKVGVAS
NDPDVDPVGACVGMKGSRVQAVIRELRGEKIDIIPWSEDPVVFAANALSPAKVSRVQITD
FTNQRLEVIVEESQLSLAIGKRGQNVRLASKLVGWNIDIRSDAEMKREVASQFQSLLSRP
DVPLTDLAALNPAYAQYLKKAGIATLEELADANVNDVASILDISFDEAVALIEQARQLLP
ATGTNEEAASETAAEEAAPELAAGAEATPEDTAEVSLQSGGTADAPTATDTDAAPAAAAL
DSPTTDAIAPEGEPELQPGA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtccatactgtcagagcagattcaggctatcagccgggacaaaaacattgacccacgc
atcatcatcgaggccctgcaggatgcagtgacggccgcggcgcggcggcacttcaagtcg
aatgaaaacctcgtggctatttacagcgaggaaagccaccgcatggaactctacgccgcc
aagcgtgtgactgatgtcgtcgtctgcccggaaacggaagtctcccttgaagaagccctt
caggctgacgcctcggcagaaattggcgatgtgctttacgagccacggcaggaccgcttc
gaggaactcggccgcatcgccgcgcaaaccgccaaacaaatcatcatccagaaggtgcgg
gaagccgaacgcgaaaacatctacaacgaatacatcgggcgtgtgggggagattgtccac
ggcgtcgtcaaacgctttgagcggggcaacatcatccttgacatcgggcgcacggaggcc
ctgctgccccgctccgaacagtcgccggcggaaaacttcagccagaacgaccgggtacgg
gtcgtcatcacccaggtgacgaaagatgccaagggtccgcaggttcacgtttcgcgcacc
agtcccgaactgctcaagcggctgtttgagatggaagtccctgaaatctacgacggaact
gtgaccatcaaggcggcggcacgggaaccgggcgagcgggcaaaggtgggcgtggcctcg
aatgacccggatgtggacccggtgggcgcctgtgtcgggatgaagggttcgcgcgtacag
gccgtcatccgggagctgcgcggtgaaaaaattgacatcattccgtggtcggaggacccg
gtggtgtttgccgccaacgccctctctccggccaaggtgagccgtgtccagattaccgat
ttcaccaaccagcgccttgaagtcattgttgaggaatcccagctcagtctggccatcggc
aaacgggggcagaacgtccggctggcctccaaactcgtggggtggaacattgacatccgc
agcgatgccgaaatgaaacgcgaagtggccagccagttccagtccctgctttcgcggccg
gatgttccgctgaccgatttggcggctctcaatccggcctatgcccagtatctgaagaaa
gctggcattgccacccttgaagagctggccgatgccaatgtcaacgatgtggccagcatc
ctggacatcagcttcgatgaagccgtggcactgattgagcaggcccgacaactcctgcca
gccacagggacaaacgaagaagccgcatcggaaacggcggcagaagaagccgcaccggag
cttgcagccggggcggaagcgacaccggaggacacggccgaggtgtcgctccaatccggg
ggcacggctgacgcaccaaccgcaacggacacggacgccgctccggccgcagcggcgctg
gacagtccgacgacagatgccatcgcgccagagggtgagccggagcttcagccgggtgcc
tga
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