Chloracidobacterium thermophilum: Cabther_A0660
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Entry
Cabther_A0660 CDS
T01629
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ctm
Chloracidobacterium thermophilum
Pathway
ctm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cabther_A0660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctm03400
]
Cabther_A0660
DNA repair and recombination proteins [BR:
ctm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cabther_A0660
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cabther_A0660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AEP11417
UniProt:
G2LFL6
LinkDB
All DBs
Position
1:774635..775426
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AA seq
263 aa
AA seq
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MSAATTLHTSDAFVLRTYPYGEAHKVVVLFTRSGGLVRAVAYGAQSKRQKYGAALELFSE
VSVVYRERQGQELVSLVACDVKRLHFAATSDPVLMAMLAYWAELTSELFPAHQANDPAYR
LLAAACDLADRHAQTPRPETPDALMVYVETWLLRLAGFLPDWKHCARCGVDLLSTPAARL
SADGTPGCTTCLAYGRDISLPARRAYAAIQRQSPGDFWHHAPAADTLAELAALNGQLVCL
ALERPPKSRAVWQQLRDGMASVT
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcaacgacgttacacaccagcgacgctttcgtactccgtacctatccgtat
ggcgaagcgcacaaggttgtcgtgctgtttacccgcagcggcggactggtgcgcgctgtg
gcctacggggcccagagcaaacgccagaagtacggcgcggcgctggagctgttctccgag
gtgagcgtggtgtaccgcgaacgccaggggcaggaactcgtgtcgcttgtggcctgcgat
gtcaagcgcctgcacttcgcggcaacgtccgatccggttctgatggccatgctggcctac
tgggccgaactcaccagtgagctgtttccggcacatcaggccaacgaccctgcatatcgc
ctgctcgccgcagcgtgcgatctggccgaccgccacgcgcagacgccacggccggaaacg
cctgatgccctgatggtctatgttgaaacctggctcctgcggctggccggttttctgccg
gactggaaacactgcgcccggtgtggtgtagatttgctgtccacgccggccgcgcgcctt
tccgctgacggcacgccgggctgcacgacctgtctcgcgtatggccgggacatcagcctg
ccggcgcgccgggcttatgccgcaatacagcgtcagtcgccgggtgatttctggcatcat
gcgccagccgccgatacactggccgaactggccgcgctcaacggacaactggtatgtctg
gcgttggagcgccctccaaagagccgggccgtctggcagcagcttcgggacgggatggcg
tctgtcacctga
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