Chloracidobacterium thermophilum: Cabther_A0936
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Entry
Cabther_A0936 CDS
T01629
Name
(GenBank) DNA-directed DNA polymerase III (polc)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ctm
Chloracidobacterium thermophilum
Pathway
ctm03030
DNA replication
ctm03430
Mismatch repair
ctm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cabther_A0936
03430 Mismatch repair
Cabther_A0936
03440 Homologous recombination
Cabther_A0936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctm03032
]
Cabther_A0936
03400 DNA repair and recombination proteins [BR:
ctm03400
]
Cabther_A0936
Enzymes [BR:
ctm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cabther_A0936
DNA replication proteins [BR:
ctm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cabther_A0936
DNA repair and recombination proteins [BR:
ctm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cabther_A0936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
CoxE_N
Intein_splicing
DUF6282
DUF6183
Motif
Other DBs
NCBI-ProteinID:
AEP11693
UniProt:
G2LFP9
LinkDB
All DBs
Position
1:1113592..1116315
Genome browser
AA seq
907 aa
AA seq
DB search
MAAEDFVHLHLHSDYSLLDGAIQHEALAEQAQRLGFKAIAVTDHGNMFGAMGFANAMKKV
GVKPIIGMEAYVARGSRHDRGKPDTDGERGTNHLILLALDETGYKNLVRLASLGYTEGYY
YKPRIDKEVLARHAEGLVALSACMSGVPASLILRDRVEQAQCEIGEYNEIFGRGRYFLEL
QSHRGLEDNQTKVNRALTELAARLDIPLVVTNDAHFLTQDDYEAHCVLMCLQTGKALREG
SFHYSPDHYVKSAAEMWALWGNENPQALRNTLKIAEMSTFEFGKAPNYLPIFPVPEGFTL
TSYFEHVVRAGLEERLQRLAPSNPEQYRARLDYEISIIERMGYEGYFLVVWDFIRHARER
GIPVGPGRGSAAGSLVAYSLHITDVDPLAHDLLFERFLNPERVSMPDIDVDFCMRGRSAV
IEYVSQFYGRENVSQIATFGTMASRAVIKDVGRVLEMPYPEVEKIAKLIPPPQRGRNVSI
DDALTMVPELKQAYEKRPEVKRLIDLARRLEGGARHSSIHAAGVVISPQPVAELVPVFKT
KTRDRERGEVEVIATQYNMNDLEKAGMLKMDFLGLTALTIIEDCLTSIERETGQRPDLTQ
IPTNDPAALKLFGEGETDAVFQFEGDGISEIARRLKPSGLDDIVALNALYRPGPLDSGMV
DDYIERRHGRRRVTYDFKELKDVLENTYGVPVFQEQIMAIFQRLAGYSLGEADLVRRAMG
KKKREELDAHKTKFIAQAMARGHDRAKLEKLWQQLEGFADYAFNKCVTGEATLRDAVTGA
AVSIAELASRDVEAAGAPFITWSWNGQEVVVNELVEVFPTGEKEVVEIELEDGRTLRCTL
DHKFYTRDADGQGCFLPLREILARGLALYTCDEPAAEANTPPTGMEKPHPGQPCVQDTQA
GAQGLCR
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaagactttgttcacctgcatctgcactccgattacagccttctggacggc
gccatccagcacgaggcgctggccgagcaggcgcagcgcctgggtttcaaagccattgcc
gtcaccgaccacggcaacatgttcggcgcgatgggcttcgccaacgccatgaaaaaagtc
ggcgtcaagcccatcatcggcatggaagcctacgttgcccgtggttcgcgccatgatcgt
ggcaaacccgacaccgacggcgaacgcggcaccaatcacctcattctgctggctctggac
gaaacgggatacaaaaacctcgtccggctcgcctcgctgggctataccgagggctactac
tacaagccccggattgacaaggaagtgctcgcccggcacgccgaagggttggtggccctt
tcggcctgtatgtccggcgtgcccgcgtcgctcatcctgcgcgaccgggttgagcaggcc
cagtgtgagattggggaatacaacgaaatcttcggccggggacgctactttctcgaactt
caatcacaccgtgggcttgaagacaaccagaccaaggtcaaccgggcgctcaccgaactg
gcagcccggcttgacataccgctcgttgtcaccaatgacgcccattttctgactcaggat
gactacgaagcccactgcgtgctgatgtgcctgcaaaccggcaaggcattgcgtgagggc
agctttcactactcacctgaccactatgtgaaaagcgccgccgaaatgtgggccctgtgg
ggcaacgaaaacccgcaggcgctgcgcaacacactcaagattgccgagatgtccactttc
gagtttggcaaagcaccaaactacctgcccatctttcctgtgccggaggggtttaccctg
acgagctactttgagcacgtagtccgtgccggtctggaagaaaggctgcagcgccttgcc
ccgtccaacccggaacaataccgcgcccgcctcgactacgaaatcagcatcatcgagcgc
atgggctatgagggctactttctcgtcgtctgggacttcatccggcatgcccgcgagcgg
gggattccggtcggacccggacgcggcagcgccgccggttcgcttgtcgcttacagcctg
cacatcacggatgttgacccgctggcgcacgatctgctctttgagcggtttctcaacccg
gagcgcgtctccatgcccgatattgacgtggatttctgtatgcgtgggcgcagtgcggtc
atcgagtacgtcagccagttttacgggcgcgaaaacgtttcccagattgccactttcggg
accatggcttcacgggcggtcatcaaggatgtcgggcgcgtgctggaaatgccctacccg
gaggttgagaaaatcgccaagctcattccgccgccacagcgtgggcgcaacgtctccatt
gacgacgccctcaccatggtgcctgagctgaaacaggcttacgagaaacggcccgaagtc
aagcgcctcatcgatctggcccgccgacttgagggcggcgcccggcactcctccatccat
gccgctggcgtggtgatctcaccgcagccggtggcggaactcgtgccagtgttcaaaacc
aaaacccgtgaccgcgagcggggtgaagtcgaggtcattgccacgcagtacaacatgaac
gacctcgaaaaggccggcatgctcaagatggacttcctggggttgaccgccctgaccatc
atcgaggactgcctgacgagcatcgagcgggaaacgggccagcgtcctgacctgacgcaa
atccccacaaacgatccggcagcgctcaagctctttggagaaggcgaaaccgatgccgtg
tttcagtttgagggggacggcatcagcgaaattgcccggcggctcaagcccagcgggctg
gatgacatcgtggcgctcaatgcgctctaccgtccagggccgctcgattccgggatggtg
gacgactacatcgagcgacgccacggccggcggcgggtgacgtacgacttcaaggaactc
aaggacgtgctggaaaacacctacggcgtgccggttttccaagagcagatcatggcgatt
ttccagcgcctggccgggtattccctgggcgaagccgatctggtacggcgggcgatgggc
aagaaaaagcgcgaggaacttgacgcccacaaaaccaagttcatcgcccaggccatggcg
cgcggacacgaccgcgccaaactcgaaaagctctggcaacagcttgaaggctttgccgac
tatgccttcaacaagtgtgtcaccggcgaggccactctgcgggatgctgtcaccggtgcg
gccgtttcaattgccgaactggccagccgtgacgtggaggcggccggcgcacccttcatc
acctggagctggaacggccaggaagtcgtggtcaacgagttggttgaggtgtttcccacc
ggcgaaaaggaagtcgtcgaaattgaactcgaagacgggcggacgctgcgctgtacgctt
gaccacaagttttacacccgtgacgcggatgggcagggctgttttctcccgttgcgggag
attctggcgcgggggctggcactttacacctgcgatgaacctgcggctgaagccaatacg
ccgccgactggtatggagaaaccgcatcctggacagccctgcgttcaggacacacaagcc
ggtgcacagggcctgtgcaggtaa
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