Chloracidobacterium thermophilum: Cabther_A1011
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Entry
Cabther_A1011 CDS
T01629
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ctm
Chloracidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctm03032
]
Cabther_A1011
03400 DNA repair and recombination proteins [BR:
ctm03400
]
Cabther_A1011
Enzymes [BR:
ctm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cabther_A1011
DNA replication proteins [BR:
ctm03032
]
Prokaryotic type
DNA Topoisomerases
Cabther_A1011
DNA repair and recombination proteins [BR:
ctm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cabther_A1011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AEP11765
UniProt:
G2LH23
LinkDB
All DBs
Position
1:1193619..1196150
Genome browser
AA seq
843 aa
AA seq
DB search
MTKGLVIVESPAKAKTITKYLGKDFTVLASYGHIKDLPEKELGVDVEHGFEPTYEIIPDT
KKRNNSKTVRELKSAARKAESIYLAADPDREGEAICQHLREELVGDKEQKPVYRLLFNEI
TKDAIQASLQSPRQINQALVEAQQARRVLDRLVGYEVSPMLNRGLGGGKVALSAGRVQSV
ALRLVVEREREILAFQPTEYWTFDARFAAALPPEFTAKLFSIHGETLKTGDFDKQRRNER
HVRTEAEARDLERQLREVAEWRVAAVTTREKKRHPVAPFITSTLQQEASRKLSFPVKKTM
SLAQKLYEGIELGAEGSVGLITYMRTDSTRIADSAIAEVRDFIAAQYGANRLPAKPNQYK
NKKGAQDAHEAIRPTSVWRTPEKVAPYLEADELALYRLIWQRFVASQMTPALFDATTIDI
EGGPGFVFRATGAVLRFDGFLAVYEEGKDELDADDEALARKLPQVAAGERVECRELQVNQ
SFTRPPARYTEATLVKTLEERGIGRPSTYAQTLSVIQARNYVEKRDGRFHPTPLGMVIAD
VLTENFADLFDPGYTAVLETQLDEIEEGKLNWREALEEFYRKFRADLEAAKANLKKAKEG
VATDERCHKCGAAMVLKLGRFGKYLACTNLECRATRDYGTLPTATSDPGTAAEAVGEIAC
DACGRPMVRKRGRWGEFLACTGYPECKTTRNLTRTGAPKPAPVQLDEACPTCGQPLAVRQ
GRYGEFIGCSNYPKCTYIKREAIMPCPRPGCGGDITERRSGRGRVFYKCTNTACDVVYWD
KPVTHPCPSCGAPFTLQKTNAQGETYHYCADKEHCGWTELPAEKRKKKDTLPASKNPSAS
EAA
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaggattggtcattgttgagtctccggcaaaggccaaaacgattacgaagtat
cttggcaaggactttactgtgctggcctcgtatggtcacatcaaggacctgcccgaaaag
gaacttggtgtggatgtcgagcatggtttcgagccgacctacgagatcattcccgacacg
aaaaagcgcaacaactccaagaccgtacgggagctgaagtctgccgcccggaaagcggag
tccatctacctggcggccgaccccgaccgcgaaggggaagccatctgtcagcacctgcgc
gaagagttggtgggcgacaaggaacaaaagccggtctatcgcctgttgttcaacgaaatc
accaaggatgccattcaggcttcattgcagtcgccacggcaaatcaaccaggcactggtg
gaagcccagcaggcgcggcgtgtgcttgaccgccttgtgggctatgaagtcagccccatg
ctcaaccgtgggcttggcggcggcaaggttgcgctctcggccggacgggtacaatccgtg
gctctgcgtcttgtcgttgagcgcgagcgcgagattctggcttttcaaccaaccgaatac
tggacctttgatgcccgtttcgccgccgcacttccgccggagtttacggccaagttgttt
tccattcatggcgaaacgctcaaaaccggcgactttgacaaacagcgcaggaacgagcgc
cacgtccgtaccgaagccgaagcccgtgaccttgaacgccagctccgtgaagttgcggaa
tggcgtgtggccgcggtgacgaccagggagaagaaacgccatccggttgcgcccttcatc
acttcgacccttcagcaggaagcgtcccggaagctttcttttcccgtcaagaaaaccatg
tcgctggcgcaaaagctctacgaaggcatcgagctgggggctgaaggcagcgtcgggctg
attacctacatgcggacggattcaacccggattgccgattccgccatagccgaagtgcgc
gacttcattgcagcgcagtacggtgccaatcggctgcccgccaagcccaaccagtacaaa
aacaagaagggcgcccaggatgcccacgaggccattcgtccgacatcggtctggcgcacg
cccgaaaaggttgccccttaccttgaggctgatgaactggctctgtaccggctgatctgg
cagcgtttcgtggcctcccagatgacgccggccctctttgacgctacgacgattgacatc
gaaggcgggccgggctttgtcttccgggcgaccggggcggtgctccgtttcgacggtttt
ctggcagtctatgaggaagggaaggacgaactcgatgctgatgacgaagctctggcgcgc
aaactgccacaggttgccgccggggagcgcgtcgagtgtcgtgaactccaggtcaatcaa
agttttacccgtccaccggcccgctacacggaagccacgctggtcaaaacccttgaggag
cggggcatcgggcgaccctcgacctatgcccaaacgctgtcggtcattcaggcccgcaac
tacgtcgagaaacgtgacgggcggtttcatcctacgccccttgggatggtgattgccgat
gtcctcacggaaaatttcgccgacctttttgacccgggctatacagcggtgctggagaca
cagctcgacgaaatcgaggaaggcaaactcaactggcgggaagcactcgaagagttttac
cggaagtttcgtgctgacctggaagctgccaaggccaacctcaaaaaagccaaggaaggg
gtggctacggacgaacgctgccacaaatgcggggcggccatggtgctcaagctggggcgc
tttggaaagtatctggcctgtaccaacttggagtgcagggcaacccgggactacgggacg
ctgccaacggctacgtcggaccctggcacggccgctgaagctgttggggagatcgcctgt
gacgcctgcgggcgtccgatggtacgcaagcgtggacgctggggcgagtttctcgcctgc
acgggctacccggagtgcaaaacgacccgcaatctgaccaggaccggcgctcccaagcct
gcccctgtccagcttgacgaagcctgtccaacctgtggccagccactggccgtccggcag
ggacgctacggcgagttcatcggctgctcaaactatccgaaatgcacgtatatcaagcgt
gaagccatcatgccctgtccgcggccgggctgcggcggcgacatcaccgaacgccggtcc
gggcgtggccgggtgttctacaagtgcaccaatacggcctgtgatgtggtctattgggac
aagccggtaactcacccctgcccaagctgcggggcgccctttaccctccagaaaacgaat
gcccagggggagacgtaccattactgcgccgacaaggaacattgcggctggacggaactc
ccggcggagaagcgaaagaaaaaagacacgctgccggcatccaaaaacccgtctgcctct
gaggccgcgtag
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