Chloracidobacterium thermophilum: Cabther_A1042
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Entry
Cabther_A1042 CDS
T01629
Name
(GenBank) putative periplasmic ligand-binding sensor domain protein
Organism
ctm
Chloracidobacterium thermophilum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reg_prop
CarboxypepD_reg
CarbopepD_reg_2
DUF5074
SGL
AAA_22
PEGA
nSTAND2
nSTAND1
fn3_3
Phage_tube_C
AAA_14
ATPase_2
Y_Y_Y
MurJ
Motif
Other DBs
NCBI-ProteinID:
AEP11796
UniProt:
G2LH54
LinkDB
All DBs
Position
1:1228546..1232679
Genome browser
AA seq
1377 aa
AA seq
DB search
MKSGRDSSITQYAIILRQGKAERGGIAGFSGWIGWLWLGLILALPGGQFAAQSPPPGPAI
SGVVVGESGTPLADVKVVCTGPTAPSTSLLTAGDGRFTFPLPRIGKYTIVATASGYRPQT
QTITLNRLDETPADIKLQLSPSSLRVLVRDERAGTPMAGAVVTARLRESSRREASALRAL
ESRRGEYFFGRMEAGVYEVTAVVTGYEAKTSEVVVTGERTTLEVTLLLNRVSTIPLGIRS
LDRSFVVPRLPSNDVQTVFPDRDGSVWFGTAAGVCRFDGQQFWSSEAPESPLSPLAGKSV
TALARTADGTLWFGLPTGLAALRPTSTTAMALSEPAVAVTCLLPGPSEDLWVGTGQGLYR
YWPSPPRWDFIREIGNTRIRALLAVSGGLVAATDRGLFRWPSGPGWEPVLPAAQVGELAA
YGLAADPQSLTVWCTTAAGLYTLTPDGQLLPVSGSMLQRPLGACHVDSEGHVWCARADGP
GVVVYDPRRQETAEVLTDTEVTAVAGDPDQNVWLATRKGALRYDAYSFVVFDTSRGLPDS
DVHAMAPRAEGGLWVGTARGVYAFDGIRFQRVHPELDKISVRALLAAENRLWVGAENGLW
LWDGSTVRAVMAGDSAFSQVRSLLLDAARQTLWVATAKALFKVDSTTLKLDSESIPLDGE
VRMALLSRSGTVWLATNDGVYRYEPGTAELVVIGTTLGLESLDVRAIVEQPQSGRFWLAT
GRGIETFDGVSFISDEFRAAVQGGDVQTLYVEQHPSGAFLWVGLGDGSLRKFLLDGDGVA
QTYRRDRYDLGGLRFRAMVATPDGHLWLATDAGLVRHRPNVRAPVIDIRLEADGAELPGT
AEASLRAGFHRLKFRFTALSQAGPVTYFYRLSGRDAKWRILSPERTPLTTAEYAVAGLPA
GEHIFEVRALNRDLYGQQSPVQRYVVRIDAPFYLRGWFWALCVLVMTGGGTGVWFVQRAR
SREYVLPPALRQFTPIQPNPYVVGNPIRSQAMFFGREDDFHYVARKLEGTPQGLVIVFCG
ERRTGKSSILYQMANGRLGTAFVPVFIDLQEMLVQGDREFFSRVARLVVEAVAKATATPV
SLAADPLFTWAEGMEVAATARDSQASGGNVYDQVREFIGRALQQIGNRQMVWLVDEYELF
ETKIEEDKLSRDLLPFLASLLDRYERLSFVFTGSRRLEERDKRLWRDLLRRSLFRKVSYL
TPNDTRRLITEPVRDRVVYGRGVVEAIVRLTAGQPFYTQVICQNIVDFLNEQERHYVLRA
DVLTIVEEVVNNPLPQMIYFWEALSDDEKLVLALVADTLVDEQDVVSSTRLAARITECSY
PMTLSEATIRLTLEELFRRELLEKYGADAFAYRVDLLRHWIRRSHSVWQVVGEVRSR
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgggcgtgatagttccatcacacagtacgcaattatacttcgccagggcaaa
gctgaaagagggggaatcgctggcttttcaggctggattggttggctctggctcggcctg
attctcgccctgccgggcggacagtttgccgcgcagtcgccaccgccgggccccgccatt
agtggcgtggtggttggtgagtccggcacaccgctggccgatgtcaaagtggtctgtacc
ggacccaccgcgccgtcaacctcacttctgacggccggagatggcaggttcacctttccg
ctcccgcgtattggcaaatacaccattgtggcaacggccagcggctaccgtccacagacc
cagaccatcaccctgaatcgtctggatgaaactccggccgacatcaaactccagctctca
cccagttccctgcgcgttctggtgcgggatgagcgggccggtacgcccatggccggcgcc
gtggtgacagcgcggctgcgggaatcttcccgccgggaagccagcgccctgcgtgctctg
gagagccggcggggcgaatacttctttgggcggatggaagccggcgtctatgaggtcacg
gcggtggtgacaggctacgaagccaaaacgtccgaagttgtcgtcaccggtgagcggacg
acgctcgaagtgactctcctgctcaatcgggtttcaaccattccacttggcatccgcagt
ctggaccgctcttttgtagtgccacggttgccttccaacgacgtgcagacggtttttccc
gaccgtgacgggagtgtgtggtttggcacggcggccggcgtgtgccgtttcgacgggcag
cagttctggtcatccgaagcaccggagtcgcctctgtctccgctggctggaaaatcggta
acggcgctggcgcggacggcggacggcactctgtggtttgggctgccaaccgggctggct
gccctgaggccaacgtcaacgactgcgatggccctcagtgaaccggccgtggccgtcacc
tgtctgctgcccggtccgtccgaagacctgtgggtgggcaccgggcagggcctgtaccgc
tactggccgtcgccaccgcgctgggacttcatccgggaaatcggcaacacgcgcatccgc
gccttactggctgtttccggcggccttgtggcagctaccgaccggggattgttccggtgg
ccatcggggccgggctgggaaccggtgctgcccgctgcccaagtcggggaacttgctgcg
tatggcctggcggctgatccacagtcgctgaccgtgtggtgcactacggctgccgggctt
tatactctgacacccgatggccagcttctgccggtttccggctctatgttgcagcgtcca
ctgggggcctgccacgtggatagtgagggacatgtgtggtgcgcccgcgccgatgggccc
ggtgtggtggtctatgacccacgtcgccaggaaactgccgaagtgctgaccgacaccgaa
gtgaccgccgtggccggcgatcccgaccagaatgtgtggctggccacccgcaagggggcg
ctgcggtacgatgcctacagttttgtcgtctttgataccagtcgcgggctgcccgacagt
gacgtgcacgccatggctccgcgagccgaaggtgggctgtgggttggtacagcgcggggg
gtctatgcctttgacgggattcgcttccagcgcgtccaccctgagttggacaaaatatcc
gtgcgcgcgctgctggcggcagagaaccgtctgtgggttggggcggaaaacggtctctgg
ctgtgggatggaagtaccgtccgggctgtgatggccggcgacagcgccttttcgcaggtg
cgctccctgcttctggatgccgcgcgccagacactctgggtggccacggccaaggccctg
ttcaaggttgacagcaccaccctgaaacttgacagcgagtccattccactggatggcgaa
gtgcggatggcgctgctgtcacgttccggcacggtctggctggcgacgaacgatggcgtg
tatcgctacgagccggggacagcggaactcgtcgtcattgggacgacgctggggctggaa
agcctcgatgtgcgcgccatcgtcgagcagccccagtccgggcgcttctggctggcgacc
ggacgcggtatcgaaaccttcgatggcgtcagcttcatttccgatgaattccgcgcggct
gtgcagggcggcgatgtccagacactctacgtcgagcagcatccctccggggcctttcta
tgggttgggctgggcgacggcagcctgcgcaagtttctgctcgatggcgacggtgtggcc
cagacctatcggcgcgaccgctatgacttgggcgggctgcgcttccgggccatggtcgca
accccggacggccacctctggctggcgactgatgccggtctcgtgcgccaccgtcccaac
gtgcgggcgccggtcattgacatccgtctggaggccgatggcgccgaactgccggggacg
gccgaggcttcactgcgcgccggttttcaccggttgaaattccgtttcacggccctcagc
caggccgggcccgtgacgtacttttaccgtctgtcgggccgggatgcgaagtggcgtatc
ctttcacccgaacggactcccctgacaacggccgagtatgcggtcgctggacttccagcc
ggtgaacacatctttgaagtccgggcgctcaaccgggacctctacgggcagcagtctccg
gtgcagcggtatgtcgtgcggattgacgctccgttttacctccggggatggttctgggcg
ctctgcgttctggtgatgaccggcggcggaaccggcgtctggttcgtccagcgcgcgcgc
agccgggagtacgtcctgccgccggccctgcgccagttcacgcccatccagcccaatccc
tatgtcgtgggcaacccgattcgctcccaggcgatgtttttcgggcgggaagatgacttc
cactacgttgcccgcaagctcgaaggcaccccccaggggctggtcatcgtcttctgtggc
gagcgccggacggggaaaagctccatcctgtaccagatggccaacggccggttaggcacg
gcttttgtcccggtgttcattgacctgcaggaaatgctcgttcagggcgaccgggagttt
ttcagccgggttgcccgtctcgtggtcgaggcggttgccaaagcgacggccacaccggtc
agcctggcggccgacccgctcttcacctgggccgaagggatggaggtggcagcgactgcc
agagacagccaggcgtccggcggcaatgtgtatgaccaggtacgggagttcatcgggcgg
gccctgcagcagattggcaaccggcagatggtctggctggtggatgaatacgagctgttt
gagaccaaaatcgaagaagacaagctttcacgcgacctgctgccttttctggccagcctg
ctggaccgttacgagcgcctgtcgtttgtttttaccggctcacgccgtctcgaagaacgt
gacaagcggttgtggcgtgatttgttgcggcgctcactctttcgcaaggtgtcctacctg
acgccgaacgacacccgccggctcattacggagccagtccgggatcgtgtcgtgtatggg
cggggcgttgtggaggcgattgtccggctgaccgccgggcagcctttctacacccaggtg
atttgtcagaacattgtggactttctcaatgagcaggagcgccactatgttctgcgggcc
gatgtgctgaccatcgtggaggaagtcgtcaacaacccgctcccccagatgatctacttc
tgggaggcgctgagtgacgatgaaaagctcgttctggcgctcgtcgctgatacgctggtg
gatgagcaggacgttgtttcatccacacgcctggctgcacggattacagagtgcagctat
cccatgacactttccgaggctacgattcgtctcacgctcgaagaacttttccgccgtgag
ttgttggaaaaatatggcgccgatgccttcgcctatcgtgtggatttgctgcgccattgg
attcggcgcagtcacagcgtctggcaggtggtgggtgaagtccgttcgcgctga
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