Chloracidobacterium thermophilum: Cabther_A1144
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Entry
Cabther_A1144 CDS
T01629
Name
(GenBank) Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ctm
Chloracidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ctm01011
]
Cabther_A1144
Enzymes [BR:
ctm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Cabther_A1144
Peptidoglycan biosynthesis and degradation proteins [BR:
ctm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Cabther_A1144
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_6
TPR_19
TPR_2
TPR_14
TPR_16
ANAPC3
TPR_21
DUF5550
TPR_12
Foie-gras_1
Motif
Other DBs
NCBI-ProteinID:
AEP11898
UniProt:
G2LIK0
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All DBs
Position
1:complement(1350339..1352603)
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AA seq
754 aa
AA seq
DB search
MKALFSRLQSRWRTWLQPLPLRIGVGGLVLIAGLALGGSFTVRHCLHAATPQERTAALTE
LRQAVARAGNQPPDSLLASFERRYPDSEAAALARFRRGYDNYQQRNYATAVSLLDTPLIG
EFSRLGDYGLYYLGKAQFDSGQFQAAQATLAQVGRRYPQSLLARAATLQAGRAAAVRRDV
PGVEQVLQPLLDKGDGNALAILTLAYHTAGRLEDAQRTWRRIITEAPDSLTQDEVQNARQ
ALFPDPATAAAAVRVTDADGLRRRANRLYEARQYTAAAEDFTQLATLDPTALQSDEARLR
YGISLYFAQKLAPAATQLAAVSSQDKPRHAEALFYLSEVQRRSGSTSYPATVERLLTLYP
TSPRAGEALENLAQWAEKRGSGNYYERLIRQYPERKAGQRWHFRRAWTLHQQGSYAAALP
LLLDHVALFPASDYKGMAAYWAARNLERTGRNTEAKVLYEAIVRRYRYGYYGQQAANRLA
ALRSVPAAQLPVQHPVMRAVAGLPPARPLPETLGSEGEAWLERASQLRIIGLMDFALEEM
EAARQTAPTSPKVALEMARVYRDLGQPNRAVQALQRAHPEYLAYQGDEISREEWEIFFPL
REWETIQQEARANGLDPFIVAGLIRQESVFDANARSRANAIGLMQLLPSTGRLVANKKGT
GPITADQLYNPRLNIVLGTSYLADMCRQFGRYEYAFAAYNAGPGRVVNWLKTLPTAELDV
WIDAIPITETRLYVQGVLRNTAHYRRLYGSGNRD
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgttctcacggcttcagtcacgttggcgtacctggttgcagccactgccg
ctcaggattggcgtcggtggactcgtattgatcgccggacttgcccttggtggcagtttc
acagtgcggcactgcctgcacgccgccacgccccaggaacgcacggctgccctcaccgaa
ctccgtcaggcagtggcgcgcgccggcaatcagccgcccgacagccttcttgccagcttc
gagcgccgttatccagactctgaagctgcggctctggcccgttttcgccggggctatgac
aactaccagcaacgcaactacgccaccgcagtcagcctgctcgacacgccactcattggc
gagttcagccgtttgggtgactatgggttgtattacctgggcaaagcccagtttgacagc
ggccagttccaggccgcgcaggcaaccttggcgcaagtcggcagacgctatccgcaatcc
ctgctggcccgtgccgccacactccaggccgggcgggctgccgccgtccggcgcgatgtg
ccgggtgttgagcaggtgctccaacctctgcttgacaaaggggatggcaatgccctggcc
attctgaccctggcataccacacggccggccgtctggaagacgcccagcgcacctggcgg
cgcatcatcaccgaagcgccggacagcctgacccaggacgaagtccaaaatgcccggcag
gcattgttccctgatccggcgacggcggctgccgcggtgcgtgtcacagacgccgacgga
ctgcgccgacgcgccaaccggctctatgaagccaggcaatacacggccgctgccgaagac
ttcacccaactggcgacgcttgacccaactgcactccaaagtgatgaagcccgcctgcgg
tacggcatcagcctctactttgcccagaagttggctccggcggcaacccagcttgcggcc
gtcagcagtcaggacaaaccgcgccacgccgaagcgttgttttacctttccgaagtccag
cggcggagcggcagcaccagctatccggccacggtggagcggctgctgacgctgtatccc
acttccccacgcgctggcgaggcgctcgaaaaccttgcccagtgggctgaaaagcgcggc
agcggaaactactacgagcgactcatccggcagtaccctgagcggaaagccggccagcgg
tggcacttccggcgggcctggacacttcaccagcagggctcctatgcggccgcccttccg
cttctgctcgaccacgtggcactgtttccggcctcggattacaaaggcatggccgcctac
tgggcagcgcgcaacctggagcgcaccgggcgcaacaccgaagccaaggtactctacgaa
gccattgtccggcggtaccgctatggctactacggacagcaggcagccaatcgtctggcg
gccctgcgctccgtcccggcggcgcagcttccggtgcaacatcccgtcatgcgagctgtt
gccggcttgccgccggcccgtccgctcccggaaacccttggcagcgaaggcgaagcctgg
ctggaacgggcctcccagcttcggatcatcgggctgatggattttgccctcgaagaaatg
gaagcggcgcgtcagacggcgcccacgtcacccaaagtcgcactcgaaatggcccgcgtg
taccgcgacctcggccaacccaaccgcgccgtgcaggcgttgcagcgcgcccacccggag
tatctcgcctaccaaggcgatgaaatcagccgcgaagaatgggaaatcttctttccgttg
cgcgagtgggaaaccatccagcaggaagccagggccaatggacttgaccccttcatcgtc
gccggcctcatccgccaggagtcggtctttgacgccaacgcccgctcacgcgccaacgcc
atcggtctgatgcaactgctcccctcgaccggacggctcgtggccaacaaaaaaggcacc
ggacccattacggctgaccagctctacaatcccaggctcaacatcgtgctgggcaccagc
tacctggccgacatgtgccgccagttcgggcgctatgaatatgccttcgcagcctacaac
gccgggccgggtcgggttgtcaactggctcaagaccctgcctaccgctgagcttgatgtc
tggattgatgccatcccgattaccgaaacccggctgtatgttcagggtgtcctgcgcaat
accgcccattaccgccggctttacggctcaggcaaccgggattga
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