Chloracidobacterium thermophilum: Cabther_A1200
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Entry
Cabther_A1200 CDS
T01629
Name
(GenBank) Superfamily II DNA/RNA helicase, SNF2 family
Organism
ctm
Chloracidobacterium thermophilum
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
NOV_C
ResIII
SNF2-rel_dom
DEAD
SLFN-g3_helicase
AAA_19
ERCC3_RAD25_C
Helicase_RecD
LPD13
Motif
Other DBs
NCBI-ProteinID:
AEP11954
UniProt:
G2LD94
LinkDB
All DBs
Position
1:1418516..1422073
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AA seq
1185 aa
AA seq
DB search
MLKLEELTPGASVRGILPHSAVTVVSVQWHGSEALTLVYRDASGQVADELLFRQDEERLE
IVALGRPWSFDGNGAAFRLVAEAHRIRLAYLFDPLLAVHTSLVEPLPHQITAVYEAMLPR
QPLRFLLADDPGAGKTIMAGLLIRELMVRGDLERCLIVCPGNLVEQWQDELTRRFHLPFE
ILTNDKLEAARTGNWFLEQNLVIARLDKLARDEQAQQKLAAPANRYDLVVVDEAHKLAAS
FFGGEVKYTKRYRLGQLLSGLTRHFLLLTATPHNGKEEDFQLFLALLDEDRFEGRFRDGV
HQVDTSDLMRRMVKENLLTFDGTPLFPERIAHTVPYRLSESEAALYREVTEYVREEWGRA
EALRDDRRAGTVGFALTILQRRLASSPEAIYQSLRRRRERLEKRLRELELLRRGGAVAVN
DGAVFDAEKLEDLEDAPESEIEAAEDEILDQATAASTMDELRREIQALGRLEALAAQVRR
SGADTKWRQLSELLDEIFTTPSPEAALPKAGKYVPPAVSSPRQKLVVFTEHRDTLGYLQR
RIGDRFGRPEAVAIIHGGMGREERRQAQERFLHDPEVRVLLATDAAGEGINLQRAHLMVN
YDLPWNPNRLEQRFGRIHRIGQTEVCHLWNLVAAETREGDVYRRLLEKLEEARQALGGQV
FDVLGRLHFEGHSLRELMIEAVRYGDQPEVRARLTRAIEHAVNRDHLQDLLEERALAHDT
MDISRVTRVREDMARAEARRLQPHYVESFFLEAFRRLGGSLREREPRRYEITHVPALLRR
RHRQPGAGDPVLERYERVVFEKHLMAPAGQPLASFVCPGHPLLEAVLALTLERHGDLLKR
GAVLVDDRDPSTSPRVLFFLEHAIQDASRLSSGARQTLSRRLLYVELDAEGRARHLHYAP
YLDYRPLRDDEPDALTILKQPQCAWITGDLEQHAQSHAIATLVPEHVREVRERRLAQIEK
IRTAVKDRLTKEIAYWDRRAEELKLMEQSGKPGSRLNSQEARRRADELQSRLERRLSELE
NESRISALPPVVLGGAVIIPAGLLAHVTGKPATVTDTPADTQAVAARARAIVMDVERQLG
FEPTDREFERLGYDIESRDPKTGRLRFLEVKGRVSGAATITVTRNEILTSLNKPDDFILA
LVEFLEDGRHRVSYLRRPFQREPDFGVTSVNYDFAVLLARAEEPR
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacttgaggaactgacccccggtgcaagtgtccggggtatcctgccccattcg
gcggtcacggtcgtcagcgtgcagtggcacggctcggaggcgctgacgctggtgtaccgc
gatgcgagtggtcaggtggccgacgagcttctctttcgccaggatgaggagcgccttgag
attgtcgcgctgggccgcccgtggagctttgacggtaacggcgcggctttccgtctggtc
gcggaggcgcaccgcatccgcctcgcctacctcttcgatccgcttctggccgtgcatacc
tcgctggtggagccactgccgcaccagatcacggcggtttacgaagccatgctcccgcgt
cagccgttgcgctttctgctggccgacgaccccggagccggcaaaaccatcatggcaggc
ctgcttatccgggagctgatggtccggggcgatctggaacgctgcctgattgtctgcccc
ggaaacctggttgagcagtggcaggatgaactgacccggcgctttcacctgccgttcgag
atactgacgaacgacaaactggaagccgcccgcaccggcaactggtttcttgaacagaac
ctggtcattgcccggctggacaagctcgcgcgcgacgaacaggcgcagcaaaagctggcc
gcccccgcgaaccgctacgacctcgtggtggtggacgaagcccataagctcgccgccagc
ttcttcgggggcgaggtcaagtacaccaaacgctaccgccttggccagttgctctccggc
ctgacgcggcattttctcctgctgaccgccacgccccacaacggtaaggaagaggacttt
caactcttcctggcgctcctggacgaagatcgcttcgagggacgcttccgcgatggcgtc
caccaggtggacaccagcgacctgatgcggcggatggtgaaggaaaacctgctcaccttc
gacggtacgccgctgttcccggagcgcatcgcccacaccgttccctaccggctctcggag
tccgaggccgccctgtaccgggaggtgacggagtatgtgcgggaggagtggggccgcgcc
gaagcgctccgggatgaccgccgggcgggcacggtgggctttgcgctgaccatcctccag
cgccgcctggcctcatccccggaggccatctaccaatcgctgcgccggcgacgtgagcgg
ttggaaaaacggctgcgcgagctggaactgttgcgtcgcggtggtgcggtagccgtaaac
gatggtgctgtcttcgacgccgaaaagctcgaagacctggaggacgcgccggagagcgag
attgaagctgccgaggacgagattctcgatcaggctacggccgccagcacgatggacgaa
ctccggcgggaaatccaggcgctcggacggctggaagctcttgcggctcaggtgcgaaga
agcggcgcggataccaagtggcggcaactgtccgaactgctggacgaaatcttcaccacg
ccctccccggaagccgccctcccgaaagccgggaaatacgttcctccggcggtgtcctcg
ccacgccagaagctggtggtgtttaccgaacaccgggatacgctgggctacctgcagcgc
cgaatcggcgaccgcttcgggcgcccggaagcggtggcgatcattcacggcggcatggga
cgtgaggaacggcgtcaggcgcaggagcgctttcttcatgacccggaggtgcgggtgctg
ctggccaccgatgccgctggcgaggggatcaatctgcaacgggcgcacctgatggtcaat
tacgacctgccctggaatcccaaccgcctggagcaacggttcggccgcatccaccgcatc
ggccagaccgaggtctgccatctgtggaacctggttgcggccgaaacccgtgagggggat
gtgtaccggcggctgctggaaaagctcgaagaagcgcggcaggccctgggcgggcaggtg
tttgatgtgctgggcaggctgcacttcgagggccactccctacgggagttgatgattgaa
gccgtccgctacggcgaccagcccgaagtccgggcgcgcctgacccgggccattgaacac
gctgtgaatcgtgaccatctgcaggacctgctcgaagagcgggcgctggcccacgacacc
atggacatcagccgtgtgacccgcgtgcgggaggacatggcgcgggctgaggcacgccgc
ctgcaaccacactacgtcgagtcattttttctggaggctttccggcgtctgggcggaagc
ctccgcgagcgcgagccgcgccgctacgagattactcacgtaccggcactgctgcgccga
cgccatcgccagccgggcgctggcgacccggtgctggagcgctacgagcgggtggttttc
gagaagcacctgatggccccggcgggccagccgctcgcctcctttgtctgtccgggacat
cccctgctggaagccgtactcgctctcacccttgaacgacacggcgaccttctgaaacgc
ggcgcggtgctggtggatgaccgtgacccatccacgagtccacgggtgctttttttcctg
gagcacgccattcaggatgccagccggttgtcttcgggagcgcggcagacgctctcgcgc
cggctgctctacgttgaactggacgccgaaggccgcgcccgccatctgcactacgcgccc
tatctggactatcgtcctctgcgcgacgacgagccggatgcgctgaccatcctcaagcag
ccccagtgcgcgtggattaccggtgatcttgagcaacacgcccagagccacgccatcgcc
acgctcgttcccgaacatgtgcgtgaagtccgcgagcgacgcctggcccagatcgaaaaa
atccgcacggcggtcaaagatcgcctcaccaaggaaatcgcctactgggaccgccgggcc
gaggagctgaagctaatggagcagtccggtaagccggggtcccggctcaactcgcaggaa
gcccgccgccgggccgacgaacttcagtcccgccttgagcggcgcctgtccgaactggag
aacgagtcccggatttcagccctgccgccggtggtgctgggtggggcggtgatcattccg
gccgggctgctcgcccacgtgaccggcaagccagcgacagtgacagacaccccggctgac
acgcaggccgtggccgcccgcgcccgcgccatcgtgatggacgttgagcggcagcttggt
tttgaaccgaccgaccgggagttcgagcggctgggctacgacatcgagagccgcgacccg
aaaaccggccggctgcgcttcctggaggtcaagggccgggtcagtggagccgccacaatc
accgtcaccagaaatgagattctcacctcgctcaacaagcccgatgactttattctggcc
ctggtggagtttctggaagacggcaggcaccgggtgagctacctgcggcgtccgttccag
cgcgagcccgactttggcgttaccagcgtgaactacgactttgctgtcctcctagccagg
gccgaggagccaagatga
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