Chloracidobacterium thermophilum: Cabther_A1224
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Entry
Cabther_A1224 CDS
T01629
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ctm
Chloracidobacterium thermophilum
Pathway
ctm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cabther_A1224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctm02000
]
Cabther_A1224
Transporters [BR:
ctm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Cabther_A1224
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEP11978
UniProt:
G2LDB8
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All DBs
Position
1:1454419..1456005
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AA seq
528 aa
AA seq
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MPWHERPHPCWSWKLGWVLVAIGLMVWPGGCRRPVVLAADTLVMAVEKPPKTLDPRVGND
AVSARLHQIIFDTLVNKNEQLDIVPELADFTISPDGRVFTFRLRPGVVFHDGRPLTAEDV
KYTFESLCAPTFNSPKKGDFALVESIEAPDERTVVFRCRAPNLPMLGSLVAVGIVPKGTS
PEEAAQRPVGTGPFRVVTYRENHDIWLEANPAYFKGAPRLKRLQIRFIPDAMTRELELRK
GTVQLAVNADLAYSTNQALGKTPGLKLVQAKGTNIAYLGLNCEDARLADVRVRRALALAI
DRETIIRTVLRGMARPAAGPLPPEQWAYPEDLPPPRYDPEEARRLLAEAGYGPGRPLRLE
LKTSSAELSRQVAAVLQEQLKRVGVELSLRSFEFQTFLQDTIAGNFQMFYLINVGANQSV
DFLSYFYESSRIPTKAKGYSEGANRARYRSPEVDGWLRAAAATTDKAEQRRLYGLVQKQV
VSDVPQIFLWYPNNVAIAHERVQGITLELSGSYAFLRQVWIAEGGAAE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgccctggcatgagcggccgcacccgtgctggtcctggaaactgggctgggttctggtg
gcgattgggttgatggtctggcccggcgggtgtcggcgtccggtggtgctggcggccgat
acgctggtgatggcggttgagaagccgccgaagaccctggacccacgggtggggaatgat
gccgtttcggcgcgcctgcaccagatcatcttcgatacgctggtcaacaagaacgagcag
cttgacattgtcccggagctggcggacttcaccatttcaccggatgggcgggtgttcacc
ttccggctgcggcccggggtggtttttcacgacggccggccgctgacggccgaggacgtg
aaatacaccttcgagagcctgtgtgcgccgacgttcaactcgcccaagaagggggacttt
gcgctggtggagtccatcgaggccccggatgagcggacggttgtgtttcgctgccgggcg
ccgaacctgcccatgctgggcagtctggtggcagtggggattgtgccgaagggcacgtcg
ccggaggaagctgcccagcggccggtcgggacggggccgttccgggtcgtgacttaccgg
gaaaaccacgacatctggctggaggccaatccggcgtacttcaagggcgcaccccggctg
aagcggctgcagattcgcttcattcccgatgccatgacccgtgagctggagttgcgcaag
gggacggtgcagttggcggtgaacgctgacctggcctacagcaccaaccaggcgttgggg
aagacgccggggctgaagctcgtgcaggcgaaggggacgaacattgcctatctgggactc
aactgcgaggacgcccggctggcagatgtacgggtccggcgggcgctggcgctggcgatt
gaccgggagacgatcatccgcacggtgttgcggggcatggcgcggccggcggcggggccg
ctgccgccggagcagtgggcctacccggaagacctgccgccgccgcgctacgacccggaa
gaagcccggcggctgctggcggaagcggggtatggtccggggcggcccttgcggttggag
ctgaagacctcgtcggcggagttgtcgcggcaggtggcggcggtgttgcaggaacagctc
aagcgggtgggggtggagctgtccctgcgctcgtttgagtttcagacgtttttgcaggac
accatcgccggcaatttccagatgttttatctcatcaacgtcggggccaaccagagtgtg
gattttctgagttacttctacgagtcgtcccggattccgacgaaggcgaaggggtacagc
gagggggcgaaccgggcgcgctatcggtcgccggaagtggatggctggctgcgggcggcg
gcggcgaccacggacaaggctgagcagcggcggctgtacgggctggtgcagaaacaggtg
gtcagcgacgtgccgcagatttttctgtggtatccgaacaacgtggcgattgcccatgag
cgggtgcaggggattacgctggagttgtcggggagttatgcctttttgcgccaggtgtgg
attgcggaaggtggggcggcggagtga
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