Chloracidobacterium thermophilum: Cabther_A1389
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Entry
Cabther_A1389 CDS
T01629
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctm
Chloracidobacterium thermophilum
Pathway
ctm03420
Nucleotide excision repair
ctm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cabther_A1389
03430 Mismatch repair
Cabther_A1389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctm03400
]
Cabther_A1389
Enzymes [BR:
ctm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cabther_A1389
DNA repair and recombination proteins [BR:
ctm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cabther_A1389
MMR (mismatch excision repair)
Other MMR factors
Cabther_A1389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
EAD1
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEP12140
UniProt:
G2LG27
LinkDB
All DBs
Position
1:complement(1654841..1657066)
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AA seq
741 aa
AA seq
DB search
MNALLDGLNPEQRAAVTTTDGPLLVIAGAGSGKTRVIVHRIAYLLDQGLARPEQILAVTF
TNKAALEMKTRVHQLLPPSRRYGELLVATFHSFCVRVLRRHLDRFGGSYTRDFTIYDTDD
QGRLIKACLKELQIDEKQFPPRMIQYAISRAKNQGETPETLAPASDPKRDAILKTFRLYE
MRLAAANALDFDDLLLMTVRLLRQFPDVADAYQNRFRYILIDEYQDTNPPQFNLVRLLTQ
RHQNLCVVGDPDQSIYRFRAADIRNILEFERHYPRAKTIVLAQNYRSTKVILQAANAVIR
HNRARREKQLTTQNPVGEPIRGLIAPTAEAEADLVVEALLQWQRQRSHLPEAETRAAILY
RTNAQSRLFEEACRRRGVPYVLVGGFSFYQRAEIKDALAYLRLLLNPHDDAAFERIINVP
ARGIGKATLEIITARAARDGLSRWTAMEQVLAEGALNPRAATALAGFAGLIRDLQARLEG
SPLSTLVSAVVNRSGYLDMLAQEGTLEAESRRQNLEELVTAAAEADERGASLREFLDQAA
LVSDTDDLVDNARVTLMTIHSAKGLEFPLVFVVGLEEGLFPHARVVDDGEELEEERRLFY
VAITRARHQLYLTQAQRRRVYGEERITDPSRFLEEVPEQIVQFEAVPSSSGGVTQSPLSY
GAPYGAPASPSAAKPAVELPRSQPAASTAEGFRLGDRVEHATYGAGQVVRVADGKLDIAF
PGKGIKRFVAAAAPLTKLPRR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctttgcttgatggactcaaccccgaacaacgcgccgccgtcaccacgacggac
ggccccctgctcgtcattgccggcgccggttccgggaaaacccgggtcatcgttcaccgc
atcgcctacctgcttgaccaggggctggcgcggcccgaacagattctggccgtgaccttc
accaacaaggccgcgctcgaaatgaaaacgcgcgtccaccagcttctgccgccttcccgc
cgctacggagaactgctcgtggcgacgtttcacagcttttgtgtccgcgtcctgcgccgc
catctcgaccgctttggcggaagctacacccgcgatttcaccatttacgacaccgacgac
caggggcggctcatcaaggcctgtctgaaggaactccagattgacgaaaagcagtttccg
ccccggatgattcagtacgccatcagccgcgccaaaaatcagggcgagacgccggagacc
ctggccccggcatccgatccgaagcgggacgccatcctcaaaaccttccggctgtatgaa
atgcgcctggcggcagccaatgcgctcgactttgacgacctgttgctgatgacggtacgg
ctcctgcggcagttcccggacgtggcggatgcctaccagaaccgttttcgctacatcctc
attgacgagtaccaggacacgaatcccccgcagttcaacctggtgcggctgctgacgcaa
cgccatcagaatctgtgcgtcgtgggcgatcccgaccagtccatttaccggtttcgggca
gcggacatccgtaacattctggagttcgagcggcactacccacgggccaaaaccattgtt
ctggcgcagaactaccgttcgacgaaagtcattctccaggcggccaatgccgtcatccgg
cacaaccgcgcccgccgggaaaaacagcttacgacgcaaaatccggttggtgagccgatt
cggggtctcatcgccccgacggccgaggccgaagccgacctcgttgtggaagccttgctg
cagtggcagcgccagcggtcgcacctgccggaagccgaaacccgtgcggccatcctgtac
cggacgaatgcccagtcccggttgtttgaggaagcctgtcggcggcgtggcgtgccctac
gttctggtgggtgggttttccttttaccagcgggccgaaatcaaggatgccctggcctac
ctccggctgctgctcaatccgcatgacgacgccgctttcgagcgcatcatcaatgtgccg
gcgcggggcatcggcaaggccaccctggaaatcatcaccgcccgggccgcacgcgacggg
ctttcacgctggaccgccatggagcaggtgctggcggaaggcgcactgaatccacgtgcg
gcaacggcgctggccgggtttgccggtctgattcgtgacctacaagcccgactggaaggc
tctccgctgtccaccctggtgtcggcggtcgtcaaccgctccggctacctggacatgctg
gcccaggaaggcacgctcgaagccgaaagtcgtcggcagaacctggaagaactcgtcacg
gcggcggccgaagccgacgaacggggggcttcgctgcgggagttcctggaccaggccgcg
ctggtgtccgacaccgatgacctcgtggacaacgcccgcgtcacgctcatgacgattcac
agcgccaaggggcttgagttcccgttggtctttgtcgtcggtctggaagaagggctgttt
ccccatgcgcgcgttgtggacgacggggaggaactcgaagaagaacgacggcttttttac
gtcgccatcacccgcgccaggcatcagctctatctgacacaggcgcagcgccgccgggtg
tatggcgaagaacggatcaccgacccctcccgctttctggaagaagtcccggaacagatc
gtgcagttcgaggcagtgccgtcctcatccggcggcgttacccagtcgcccctgtcgtat
ggcgcaccgtatggcgcgccggccagcccatcggcggccaaaccggccgtggaactgcca
cgaagtcagccggcagccagtacggcggagggtttccggctgggcgaccgggtggagcac
gcaacctacggcgcagggcaggtcgtccgggtggccgacggcaagctcgacatcgctttt
ccgggcaagggcatcaagcggtttgtggcggccgccgcccccctgaccaagctgccccgg
cgctga
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