Chloracidobacterium thermophilum: Cabther_A1450
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Entry
Cabther_A1450 CDS
T01629
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
Organism
ctm
Chloracidobacterium thermophilum
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_22
Cas_Cas4
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEP12200
UniProt:
G2LHD7
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Position
1:complement(1725215..1729108)
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AA seq
1297 aa
AA seq
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MVFQVPVLVFQVKAMVVTLNPTTGLTDDQQAAIEVLDRPLVVTAGPGAGKTRVLTERFLH
LLEQPGVGVENIVAITFTNKAANEMRERIRQRLEEQIVACQGTGAELLWRQRKRQLEAAA
IGTIHSFCSRLLHEFPLAAKVDPTFTTLDEYTAAVMLDQAAQQAVTGAIDQGDDRVAELV
AAYGRATLIAELKQVFNQLRSLGIPLDEAERITAQNTLTLADYTTALQSVEQHVAALKTA
IDEEKRAKKTGKTLEAAEAFLAVWNREANGLQQAAPSVDALPAFLATLARLREALPAAHG
NVGKAVKPLQESLGTRSQGGGQLEAIYFDVCARDYQQAVFQVLRSVEFLYTKAKNESAAL
DFEDLQLRARELLESADIRRRVQERYRHFLVDEFQDTNHLQRDILGDLGLDALTSKPASG
GNRTFFFVGDRKQSIYAFRGAEVEVFDETIDSVTAKGGQHLRLEVNFRSDPRLVDFFNAI
FSRIMAAPEGSQPAELRQSGFVAHEPGVAFRAALNTGQPAVVFLYTEMPKDDKKDDEKPS
PYDESLRDIESERLAGYVRELVEQQIPLVNTAQGTPRPPTYRDIAFLFGALTDVKTYERA
LRRAGVPCYVVAGHGFYGRPEVSDLLNLLAFLDNRADDIALAGVLRSPLFGLSDETLLWL
RWTAANASDQWVSLYSQLRREAEQKQAALASEQRALLEEAVEILEELLAVRNRLPLPDLI
EQAIRRTGYDIVCAGAEDGPQRLSNLDKLVALARGFASRETHLLRDFVAYIREFRRLDAR
EAEAQLELGLDAVALLTIHKSKGLEFPVVVLPDLQRRWRQSAGKFVFERNSGLGFDVPDM
LGRRRPTALKSMALERIERREQFERMRQLYVAMTRAQDALILSAAARPKTGNAEGSSVQS
FLDWLSPWLLPEEDAGSAPPDVGPAGMEVQLDAARILVLRDSVPAVPGNADPTPLPEPSS
REAFVAQAAADARQRERARRELIRQLEDQLETVAPDPKAIHGQYHYSVAQLNSFAHCPRQ
YYFARFLDPLEDEAGLERRPVEDTERPEGQARLSPAIRGLIVHRLCEDLQPEDTDNRALR
AALQRAVASLRAEGRLEGVMLDDEAILDDVWWLAKRYAESDFRKEIDAVQRQAREPSSGC
EVWSERVFTIRCDAALVTGAMDKVLITPRPGGQGVTAHVVDFKTNAFATRPGAPGFAAEK
AEKVAWYRLQLQIYALALWELTPNVKEVRATLHFLAPDEKFELPANQAGKEATAHAVNKV
ISELVAIRTFAETDFEAKPGARCQLCRYANVCADAIR
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
ttggtttttcaggtgccggtattggtttttcaggtgaaagcgatggttgtcacactcaat
cccacgacaggcttgacggatgaccagcaggcggccatcgaggtccttgaccgcccgctg
gtcgtcacggccggcccgggcgccggcaagacgcgcgtgctgaccgagcgtttcctgcac
ctgctcgaacagccgggtgtcggcgtcgaaaacatcgtagccatcacctttacgaacaag
gccgccaacgaaatgcgcgagcgcatccggcagcgccttgaggagcagattgtggcctgt
caggggacaggcgcagagcttctgtggcggcagcgcaagcgccagcttgaagccgccgcc
atcggcacgattcacagcttttgttcgcggctgctgcacgagtttccccttgctgctaaa
gttgatccgacctttaccacgcttgatgaatacacggcggccgtcatgctcgatcaggcg
gcgcagcaggccgtcaccggcgcgattgaccagggtgatgaccgggtggcggaactggtg
gcggcttatggccgggcaacgctcattgccgaactcaagcaggtgttcaaccagctccgc
agcctgggtattcctctggacgaagccgagcgcatcaccgcgcagaacactctgacgctg
gctgattacacaaccgccttgcagtccgtagagcagcatgtggcggcgctgaaaacggcc
attgacgaggaaaagcgcgccaaaaagaccggcaaaaccctggaagcagccgaggcgttt
ctggctgtctggaaccgggaagccaatgggttgcagcaggcggctccatcagtggacgcg
ctgccggcatttctggcgacgctggcgcggttgcgcgaagccctgccggctgcgcacggc
aatgtgggcaaggcggtcaaaccgctgcaggagtcgctcggaacccgcagccagggcggg
ggacagctcgaagccatctatttcgatgtctgtgcgcgggactaccagcaggcggtcttc
caagtgttgcggagcgtggagtttctctacaccaaagccaaaaacgaatcggcggcgctc
gatttcgaggacctgcaactgcgggcgcgtgagttgctggagtccgccgacatccgacgg
cgcgtccaggaacgctaccggcactttctggtggatgagtttcaggacacgaatcacctt
caacgggatattctcggagacctcggcctcgacgctctcacgtccaaacctgccagcggc
ggcaaccggacgtttttcttcgtcggcgaccgcaagcaatccatctatgcctttcgtggg
gcggaagtcgaggtttttgacgaaaccattgattcggtgacggcaaaaggggggcagcat
ctccgtctggaggtcaactttcgcagcgacccgcgcctggtggattttttcaatgccatc
ttcagccgcatcatggccgcgccggaaggaagccagccggccgaactgcggcagagcgga
ttcgtggcgcacgagccgggcgtggcctttcgcgcggcgctcaacacagggcagccagcg
gtagtctttctctacacggaaatgcccaaggacgataagaaggacgatgagaagccctcg
ccgtacgacgaatcgctgcgtgacatcgagtccgaacggctggccgggtacgtacgggag
ctggtggagcagcaaatcccgctggtcaataccgcgcaggggacgccccggccgccgacc
taccgcgacattgccttcctgtttggggcgctgacggatgtcaagacctacgaacgcgcg
ctgcggcgggccggtgtgccgtgctatgtcgtcgccggacacggcttctacggacgcccg
gaggtctccgacctgctgaacctgctggcatttctcgacaatcgcgcggatgacattgcg
ctggccggtgtactgcgctcgccgctgttcgggctgtcggatgaaaccctgctgtggctg
cggtggacggctgccaatgcgtccgaccagtgggtttcgctgtacagccaactgcgccgc
gaagccgaacagaaacaggccgcacttgccagtgagcagcgcgccctgctggaagaggct
gtcgaaattctggaagagttgctggccgtacggaaccgcctgccgctgcctgacctcatc
gagcaggctattcgccggacaggctatgacatcgtgtgcgccggagccgaagacggccca
cagcggttgtccaatctcgacaagctggtggcgctggcccggggctttgccagccgcgag
acgcatctgctgcgggatttcgtcgcctacatccgcgagtttcgccgccttgatgcccgc
gaagccgaagcccagcttgaacttggtcttgacgccgtggcgctgctgacgattcacaag
tccaaggggctggagtttccggttgtcgtcctgccggacctgcaacgccgctggcggcaa
agcgccgggaagttcgttttcgagcggaacagcggcctgggcttcgatgtgcccgacatg
ctgggccggcggcggcccacggcgctgaaaagcatggcgctggaaaggattgagcgccgg
gagcagttcgagcggatgcgccagctttacgtggccatgacgcgcgcccaggacgccctc
attctctcggccgcggcgcgacccaaaaccggaaatgcggaaggcagttccgtccagagt
tttctggactggctgagtccgtggctgctgcctgaagaggatgccggaagcgcccccccg
gacgtggggcctgccgggatggaagtgcaactcgacgcggcccggattctcgtcctgcgg
gacagcgtcccggccgtgccagggaatgcagacccaaccccgctcccggaaccatccagc
cgggaggcgtttgtcgcgcaggcggcagccgatgccaggcagcgcgaacgggcacgccgg
gaacttatccgtcaacttgaggaccaactggaaacggttgcgcctgacccgaaagccata
catgggcagtatcactactcggtggcccagttgaacagctttgcccactgcccccgccaa
tactactttgcgcgctttctcgacccgctggaagacgaggccgggctggagcgccggccc
gtcgaagataccgaacgcccggaggggcaggcgcggctttcgccggccatacgtggtctc
atcgttcacaggctgtgcgaggacctgcaacccgaagataccgataaccgggcgctgcgg
gcggccctgcaacgcgccgtggcgtcgctgcgggcggagggacggctggaaggtgtgatg
cttgatgacgaggccatcctagacgacgtgtggtggctggcaaagcgatatgccgaaagc
gactttcggaaggaaattgatgcggtacagcgtcaggcgcgggagccgtccagcggctgc
gaagtctggagtgagcgcgtcttcaccatccggtgcgacgcggcattggtcacgggagcc
atggacaaggtgctgatcacgccccgtcccggcgggcagggggtgacggcgcacgtggtg
gatttcaagaccaatgcctttgcgacccggcccggagccccaggctttgcggcggaaaag
gctgaaaaggtcgcctggtaccgcttgcagttgcaaatctacgccctggcgctgtgggaa
ctgacgcccaacgtgaaggaagtacgcgccacgctgcactttctggccccggatgagaag
tttgaactgccggccaatcaggccggaaaggaagccactgcccacgcggtcaacaaggtc
atcagcgagctggtggcgattcggacgtttgccgaaaccgacttcgaggccaaacccggc
gcgcggtgtcagctttgccgctatgccaatgtttgtgccgatgccatccgctaa
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