Chloracidobacterium thermophilum: Cabther_A1869
Help
Entry
Cabther_A1869 CDS
T01629
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ctm
Chloracidobacterium thermophilum
Pathway
ctm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cabther_A1869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctm03400
]
Cabther_A1869
DNA repair and recombination proteins [BR:
ctm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cabther_A1869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH
HHH_2
GIY_YIG_2
GIY_YIG_domain
5_3_exonuc
CsbD
Motif
Other DBs
NCBI-ProteinID:
AEP12615
UniProt:
G2LGA2
LinkDB
All DBs
Position
1:2223596..2225422
Genome browser
AA seq
608 aa
AA seq
DB search
MSLAEKLSSLPTGPGCYLHKDAHGTVIYVGKAKNLRHRVRSYFQSSRHHDPKTQALVAHI
ADVEFIVTDTEVEALVLESNLIKQYKPRYNVLLKDDKQYPHLKLTLNEPFPRVIKTRRVL
NDGALYHGPYLPASLAHQTLRLVNQMFQLRTCDIEIDGKRDRPCLEYHIKRCLGPCVREL
CGPAEYAEAVRDVKLFFEGKNKQLVAELQARMERAAEELRFEQAARYRDQLRLIERLGET
QKMMLKDAADVDIFGYHRDGARLALQLFTMREGRIIGRREFFWEDLPPGDDFDPAAFLGE
ALTQYYALGNYVPHEVHAPHDFADRDVLEAFLSARRSAKVRILTPQRGQKRELIELVERN
ARVAFDQRFRTLKPDMADVLDELTDLLALPRFPARIECFDISHIQGAEAVASLVVFENGQ
PAKDEYRKFRIKTATGGDDFAAMREVVGRRYARLLREEKHLPDLVIVDGGKGQLSAAAQA
LRELDLEALPLASIAKREELIFVKGRESDPLRLERHSPLLHLIQAIRDEAHRFAVTFHRQ
RRTLRDFDSELLAIPGIGPKLKNRLLRNLGSLENIRRASIAELTPFVGVQRARAIWQHFH
PETPAADA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggctgaaaaactgtccagtctgcccaccggtccgggctgctacctgcacaag
gacgcccacgggacggtcatttacgtcggcaaggccaaaaacctgcgccaccgcgtgcgc
agctactttcaatccagccgccaccacgatcccaaaacccaggcccttgtggcgcacatt
gccgatgtcgagttcatcgtcaccgatacggaagtcgaggcgctggtgctcgaaagcaac
ctcatcaagcagtacaagccgcgctacaacgtcctgctcaaggatgacaagcagtatccg
cacctcaagctgacgctcaacgaaccgttcccacgggtcatcaagacgcggcgcgtactc
aatgacggggcgctgtaccacggcccgtacctgccggcttcgctggcgcaccagacgctc
cggcttgtcaaccagatgtttcagctccgcacctgcgacatcgagattgacggcaagcgc
gaccgcccctgcctcgaataccacatcaaacgctgcctcggcccctgcgtccgggagttg
tgcggcccggcggaatatgcggaagccgtccgggacgtgaagctgtttttcgagggcaaa
aacaagcaactcgtcgctgagttgcaggcccggatggaacgggcggccgaagaactgcgc
ttcgagcaggccgcccgctaccgcgatcagcttcgcctcatcgagcggctcggtgaaacc
cagaaaatgatgctcaaggacgctgccgacgtggacattttcggctaccaccgcgacggc
gcgcggctggctctccagcttttcaccatgcgcgagggccgcatcatcggacggcgcgag
tttttctgggaagacctcccgcccggcgacgacttcgacccggccgcctttctgggcgag
gcgctgacccaatactacgccttgggcaactacgtgccccacgaagtccatgccccgcac
gactttgctgaccgggacgtactggaagccttcctgtcggcgcggcgcagcgccaaagtg
cgcatcctgacgccccagcgcgggcagaagcgcgaactcatcgaactcgttgagcgcaat
gcgcgcgtggccttcgaccagcgttttcggacgctcaaacccgacatggccgatgtcctc
gacgaactgaccgacctgctggcgctgccccgcttcccggcgcgcatcgagtgtttcgac
atttcccacatccagggcgcggaggccgtcgcctccctggtcgtgtttgaaaacgggcag
ccggccaaggatgagtaccggaagtttcggatcaaaacggccaccggcggcgacgatttt
gccgccatgcgcgaggtcgtcggacggcgctacgcccggctgctgcgggaagaaaaacac
ctgcccgatctggtcattgtggatggcggcaagggacagctcagcgcggcagcgcaggcg
ctgcgggaactcgacctggaggccctgccgctggcctcgattgccaaacgcgaggaactc
atcttcgtcaaaggtcgggaatccgacccgctccggctggagcgccattcacccctgctg
catctcatccaggccatccgggatgaagcccaccgcttcgccgtcaccttccaccgccag
cgccgcacactgcgggatttcgattccgaactgctggccattcccggcatcgggccgaag
ctcaagaaccgcctgctgcgcaaccttggcagtctggaaaacatccggcgcgccagcatc
gccgaactgaccccgttcgttggtgtgcagcgcgcccgcgccatctggcagcactttcac
ccggagaccccggccgctgacgcctga
DBGET
integrated database retrieval system
