Chloracidobacterium thermophilum: Cabther_A1986
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Entry
Cabther_A1986 CDS
T01629
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ctm
Chloracidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctm03009
]
Cabther_A1986
Enzymes [BR:
ctm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Cabther_A1986
Ribosome biogenesis [BR:
ctm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Cabther_A1986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
TRAM
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_31
Methyltransf_11
Methyltransf_15
RrnaAD
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AEP12731
UniProt:
G2LIW3
LinkDB
All DBs
Position
1:2352710..2353903
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AA seq
397 aa
AA seq
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MDDSLELWIERLVAGGEGLAHLPDGRAVFIPQTAPGELVRVRLVEERPTFARGRLLEVLQ
PSPVRRAAPCPHYGTCGGCQLQHVQYAAQVEAKQAFIREALLRLGQIAWDGPVPMRTGPE
WGYRSRVQFKLAADGRRLRVGFYASGTNDLCDIETCPLLAPPLARLPAVLRQQAPSSLAG
KTLDIALGDDDGLSAFPAFADLPGRPVTRRIGHFVYTYDARCFFQVNRELVAALVAEVVP
DDLPFGGLALDLYAGVGLFTLPLARKFRQVLAIEASPNAVAFARENIRHNQLTNAQVVAE
DCARWMQMRAAAFTDRVDWLVADPPRAGLDSAVRTGLVTIRPRQIVYVSCHPATLARDLK
VLLAHGYRLTKLVGLDLFPQTAHVEVVAQLVRGDAGN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacgactccctcgaactctggattgaacgtctcgtcgccggcggcgaagggctggcc
cacctgcccgatgggcgtgccgtctttattccgcagacagcgccgggtgaactcgtgcgc
gttcgcctggttgaagaaagacccacctttgcgcgcggccgcctgctggaagtactccag
ccttcgccggtgcggcgtgccgcgccctgtccacactatggcacgtgcggcggctgtcag
ttgcaacacgtccaatatgccgcccaggtcgaggccaagcaggcgttcatccgcgaggcg
ctgctgcgcctgggacaaattgcctgggacgggcccgtcccgatgcgaaccggccccgaa
tggggctaccgcagccgcgtccagttcaagctggccgccgatggtcggcggttgcgggtt
gggttctatgcgagtggcaccaatgacctgtgtgacatcgagacctgtccgctgctggcg
ccgccgctggcccggcttccggctgtcctgcgacaacaggcaccgtcctctctggctggc
aaaaccctggacattgcccttggggatgacgatgggctgtctgccttcccggcttttgct
gaccttcccggtcgccctgttacccgccgcatcgggcatttcgtctatacctacgacgca
cgctgtttttttcaggtcaaccgggaactcgtggcggcgcttgtcgctgaagtcgtgccg
gacgacctgcctttcggcgggttggctctcgatctctatgccggcgtgggcttgttcacc
ctgccgctggcgcggaagttccggcaggtgctggccattgaagcctctccgaatgccgtg
gcctttgcccgcgaaaacatccggcacaaccaactgaccaacgcccaggtcgtcgccgaa
gactgcgcccggtggatgcagatgcgggcggctgcctttaccgaccgggtggactggctt
gtggcggacccgccgcgtgccggtctcgatagcgccgtccgcacggggttggtgacaatt
cgcccccggcagattgtctatgtctcgtgtcatccggcgaccctggcgcgcgacctgaaa
gtgctgctggcgcacggttatcgcctgacgaagctcgtcggactggacctgtttccccag
acggcccacgttgaagtcgtggcgcagcttgtacggggcgatgccggcaactga
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