Chloracidobacterium thermophilum: Cabther_A2066
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Entry
Cabther_A2066 CDS
T01629
Name
(GenBank) helicase, putative, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ctm
Chloracidobacterium thermophilum
Pathway
ctm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cabther_A2066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctm03400
]
Cabther_A2066
Enzymes [BR:
ctm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Cabther_A2066
DNA repair and recombination proteins [BR:
ctm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cabther_A2066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
HHH
AAA_22
UvrD-helicase
T2SSE
HHH_3
ABC_tran
nSTAND3
HHH_2
AAA_28
Helicase_RecD
Rad17
ATPase_2
UvrD_C
AAA
NPHP3_N
HerA_C
MeaB
AAA_16
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AEP12810
UniProt:
G2LJC1
LinkDB
All DBs
Position
1:complement(2451167..2453368)
Genome browser
AA seq
733 aa
AA seq
DB search
MNNSRPPSVLVGAVERVTYTNPETGYTVLRLRVNGEREAVTVVGYFPALSPGATLRLSGF
WTTHPTHGPQFKATQHEVTQPATLAGIEKYLGSGLIKGIGPVTARRIVAHFREATLQIIE
TDIHRLSEVPGIGRKRVELIAQAWEAQRAIKDVMLFLQSHGVSTHYAAKIYRQYGARAIQ
TVIENPYQLARDIYGVGFKTADAIAANLGIAPDAEMRLRAACLHVLQEAADQGHCFLPES
RLLASLQTLLGVTDAERLHAVLATLTAEAELVARPPAPPNVLEASYHLPYLFYAEQHIAR
LLRGLTLRPLTQLEAPARQWLDAYAARESLQLSPEQQQAVLTAATQRVAVVTGGPGCGKT
TTLRAIVGLFRWLGLRVELATPTGRAAQRLSEVTGVEARTLHRLLAYDPARGRFTHDSDY
PLDTDAVIVDEASMLDAPLAAALLKAMPARGRLLLVGDVDQLPSVGPGRVLGDIIAAGVV
PVCRLTQVFRQAEGSAIIQNAHRIRAGQFPRLIRPDGRTTTDCYFVAADTPADIQARLEQ
VVASLSRRFGYDPVNDIQVLTPMNRGEIGAVELNRRLQQALNPLRPGQPEIERLGRRFRV
GDKVVQRVNNYTREVFNGDIGRIVDIQLEDQTLTVNYDGRCVTYDWADVNELSHGFALSV
HKSQGSEYPAVVIVLHTQAFPVLSRNLLYTALTRAKRTAVLLGTTRAIGLAVRQVEAARR
YTWLAEALREPIR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactcccggccgccttcggttctcgttggtgccgtcgagcgtgtgacttatacc
aacccggaaacaggctacacggtgttgcgcctccgggtgaacggtgagcgtgaggccgta
acggtggtcgggtacttcccggcactgtcgccaggggcgacgctccgtttgtccgggttc
tggacgacccatcccacgcacggcccgcaattcaaagctacccagcacgaagtcacccag
ccggcaacgctggccggcatcgagaaatacctgggttccggtctcatcaaagggatcggc
cctgtcacggcccggcgcatcgttgcccacttccgggaagccacattgcagatcatcgag
acggacatccaccgcctgagcgaagtgcccggcatcggccgcaagcgcgttgagctgatt
gcacaggcctgggaagcacagcgcgctatcaaagacgtgatgctgtttttgcagtcgcat
ggcgtctccacccactatgccgccaagatatacaggcagtatggggcccgtgcgattcag
accgtcatcgaaaatccctaccagcttgcgcgggacatctacggggtgggtttcaaaacc
gccgacgcgattgcggccaatctgggcatagcgccggatgcggaaatgcgtctgcgggcg
gcctgcctccacgtgcttcaggaagccgccgaccaggggcactgttttctgccagaaagc
cggctgctcgcctccctgcaaacgcttctgggcgtgactgatgccgagcgcctgcacgct
gtcttggcaactctgaccgccgaggccgaactggtggcccgtccgcccgcgccgcctaac
gtgctggaagcgagttatcacctgccgtacctgttttatgccgagcagcatattgcgcgg
ctgctgcgtggtctcaccctgcgtcccctgacccaactggaagcaccggcgcggcagtgg
ctggacgcctacgcggccagggagtcgctgcaactgtcgccggagcagcagcaggccgtg
ctgacggcggcaacgcagcgcgtggcagtggttacgggcggccccggctgtggcaagaca
acgacgttgcgggccatcgttggtttgttccgctggcttgggctgcgggttgagctggcg
acaccgaccggacgcgctgcccagcggctttccgaagtgaccggcgtcgaggcgcgtacc
ctgcatcggctgctggcctacgatccggcccggggacgcttcacccacgacagcgattac
ccactcgacacggatgccgtcatcgtggacgaagcctcgatgctcgacgccccactggct
gcggcgctgctcaaggccatgccggcgcggggccggctgctgctcgtgggggatgtggac
cagttgccttccgtcggcccgggccgggtgctgggggacatcattgccgccggagtcgtg
ccggtctgccgtctgacccaggtgtttcgccaggccgaggggagcgccatcatccagaat
gcccaccggattcgggcagggcagtttccccggctcatccgaccggatggccggacaacc
accgactgctatttcgtggcggccgacaccccggcagacatccaggcgcgactcgaacag
gttgtggcgagtctgtcccggcgttttgggtacgacccggtgaacgacatccaggtgttg
acgcccatgaaccggggggagatcggtgccgtcgaactcaaccggcgcttacagcaggcg
ctcaatccgctgcgtccggggcagcctgaaatcgagcgtctgggacgccgcttccgggtc
ggggataaggtcgtgcagcgtgtcaacaactacacccgcgaagtcttcaacggcgacatc
gggcgcatcgtggacatccagcttgaggatcaaaccctgaccgtgaattacgacgggcgg
tgcgtcacttatgattgggcggatgtcaacgaactcagccacggctttgccctttccgtc
cacaaaagccaggggtcggagtatccggcggtggtgattgtgctgcatacgcaggcgttt
ccggtgctgagccgcaacctgctctacacggcgctgacgcgcgccaaacggacggcggtg
ctgctgggaacaacccgtgccattggcttggccgtgcggcaggtggaagccgcccgacgc
tacacctggctggcggaggcgctgcgtgaacccatccggtag
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