Chloracidobacterium thermophilum: Cabther_A2090
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Entry
Cabther_A2090 CDS
T01629
Name
(GenBank) delta-60 repeat domain protein
KO
K20276
large repetitive protein
Organism
ctm
Chloracidobacterium thermophilum
Pathway
ctm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cabther_A2090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5122
BACON
BACON_2
SBBP
Motif
Other DBs
NCBI-ProteinID:
AEP12833
UniProt:
G2LJE4
LinkDB
All DBs
Position
1:complement(2475385..2480421)
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AA seq
1678 aa
AA seq
DB search
MLLCFGASGTAYGQGCPGPGGPQPVSGLGAGPGSADRSFGYASGGTGAFQMTDLLNRIGV
NIPEPGEIRAIAVQRVGANANKFIVGGNFVYRVPGTNQVYRNLMRLNPNGTVDISFVPGL
LIPVVNALVVQSTPLLADRIVVGCETAPQLFRLLPNGAQDTTFSPPPLTPPTVAVLALEV
EPLLLPPSVPNPTADYIYVGLNGGTIGGRTNLARLLPNGGPDSTPGTFWGPQTAPAVQVS
VNGPVRAIKFADRLGGLGLPGIVVGGAFNLAQGGPFPPPPSFECLNVAFFPTDGDFFSFS
VGFFTNFFKGFDGPINAIAVSVSPANVSEIFVGGEFGNCVTFASPPNVARPRVAKFSFFA
GLDTVFNPNPATSVPNPVRALVLTGGPPNFTAPPPSPPLPPPPPLLLSVLHVGGQETTTA
FADVALSPVTGGLVVDVDPITPGLQPTFFTRSPFFPANPAVVRAMAANNQPLPNGGALFG
GAFLNATVYGQNLNAPAQKLVATFTNLYSPPSPLGPVFSLPPPPPPFGPNPGTLPGFVAL
GPTQFYASALLPNGDLLIGGDVGVNGNASLPASLDDLEAVLYRIDPCGTVNVVARFRNIS
GYLVRNDVDNGTFVSPPQDINITPGQGFRRVDFVDPPSIRAIAVDSAGNIYVGGQFNRVS
DGPGGPFQPWNNLIRLKSDGTIDPLFAPGAGLTSYAPGYPVMRLGGPTGFGTAGVGFTTV
DPQTALPALTGNCDATPTPPVTGTGEKFNPNEGRVNAIVLQPNGRILIGGEFKCYNGIPR
GGLARLLPNGSLDTSFGDPLAPLPGVDDYSLCDDPIPPPGVPRTNPAVAYNRARVNAILL
QPDGSVVVGGLFGKANGIARYNLARFDSAGFLDLTFSSGPTSTVFPTGTAGVGGGGSGAT
SNGRGGEIFALARQSLGPNAGRILVGGVFTTILNQTGAPGNLPRTAFTRFETNGRHDATF
AQLNFTAAGTVRAIALQADDRPIIGGSFRIGPGTAGGTQYTSNTTRVRVFRCGVNGAFTD
TVDSLNIPRSSWLAVQPPPGVTVPFQPGPYAVPGVGSLASVFAPTATLPEINYYPGGSVS
PAFGTGFFNATNVAMAVNTIALDPTRRRAYIGGLFNVFESARADFQNDNAGAPNGLSLDI
RWPGVAALQTGCTYGLVAPTFPPFTVLPAGGTVNLGAINPAGGNLTIGSLTRSAVSVCDA
LPTVSTGSTFVTIVGVVPRTAGPGPSFADIIINVSPNNTGANRTGSVTVTLPSETSTSPP
PTTFTFTQGPASGCTYTATAVPASFPVAGGTGQFQITTGAGCTWTITGLPTWISASPLSG
SGSSTVNFTVAANTGAPRSATVTVAGQNITITQAGTCTLTLGTATGTSLPVTGGTGSFTV
TTLAGCTYTATSSAPWLVITGGASGGPTGTVTFSVGRNSGAARSATITVTAPGVPAQTVT
VSQAPDLAGPDTVGMFRSSNGFFYLRFSNTSGNADTDFFYGTAGDVPLSGDWDADGVTTI
GIFRNGQFFLRNSNTAGFADVPAFAISGTQPGDIPLAGDWDGNGSTTVGLFRAGVFLLRN
SNTAGPADVVINYALPTDTPIVGDWDGDGVTTIGLFRASVAFFGLRNSNTAGPADLQFFF
GAPNDVPVAGDWDNDGVTTIGVFRAGTFFLRNSNTAGVANLTVNYGLATDRPVIGRWQ
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
gtgctgctgtgctttggcgccagcggaaccgcgtatggtcaaggctgccccggacccggc
ggcccgcagccggtgtctgggctgggcgccgggccgggcagtgccgaccggagtttcggg
tatgcctccggcggcaccggcgcttttcagatgacggatttgctgaaccggattggcgtg
aacattcccgagccgggtgagattcgcgccattgcggtgcagcgggtgggtgccaatgcc
aacaagttcatcgtgggcggaaactttgtgtaccgcgttccgggaaccaaccaggtttac
cgcaacctcatgcggttgaatcccaacggcacggtggatatttcttttgttcccgggcta
ctcataccggtggtcaatgctctggtggttcaaagcacgcctctgttggctgatcgcatc
gtggtcggctgtgagacagcgccccagctgttccggttgctgccgaacggcgcgcaggat
accaccttcagcccaccgccgctgacgccgccgactgtagccgtgctggcgctggaagtt
gaacctttgctcttgccgccctctgtgcccaatcccaccgcagactacatctatgttggt
ctcaacggcggcacgattggcggccggacaaacctcgcccgtcttctaccaaacgggggg
cctgattcaaccccaggtactttctgggggccccaaacagcccctgctgtgcaggtttct
gtcaatggtccggtgcgggcgatcaagtttgctgacagattgggtggtcttggcttaccg
gggatcgttgtgggtggcgctttcaatctggctcagggcggcccatttccgccaccgcct
tcatttgagtgcctcaatgtggcgtttttccccacggatggtgattttttcagtttctct
gttggtttcttcaccaactttttcaaaggatttgacggtcccatcaacgccattgccgtc
agcgtgagtcctgccaacgtgagtgagattttcgttggcggggagtttggcaactgtgtc
acgtttgcttcccccccgaacgttgctcgtccgcgtgttgccaaattctctttttttgcc
ggactggatactgtcttcaatcctaaccctgctacatcggttcccaacccggtgcgggcg
ctggtgcttactgggggaccaccgaattttacagcaccaccaccctctcccccacttcca
ccaccgccaccgcttctactatccgtcctgcacgttggcgggcaggaaaccaccacggcg
tttgcagatgtggctctgagtccagtgactggcggtctggttgttgacgttgatcctatc
acccctggtcttcagcccactttcttcacaaggtcgcccttcttcccggcgaacccggcg
gtggtgcgggccatggcggcgaataaccagccattaccaaacggcggggcgctgtttggc
ggggcattcttgaatgccacggtgtatggacagaacttgaatgccccggcacagaaactg
gtggcgacattcaccaatttgtattctcctcccagcccgttgggtccggtgttttcactg
ccgccgccgccgccgccttttggtcccaatcccggtacgctcccgggctttgtggcgctg
gggccgacacagttctacgcctcggcgctgttgcccaacggcgacctgctcatcgggggc
gatgtcggggtcaatggcaacgcatctttgccagcctccctcgacgatcttgaagccgtg
ctgtaccggattgacccctgcgggacggtcaacgtcgtagcgcgcttccggaacatttcc
ggctatcttgtccgcaacgatgtagataacggcacgtttgtgtcaccaccgcaggacatc
aatatcacgccaggacagggcttccgccgggtggattttgtcgatccgccctccatccgg
gcgattgccgtggattctgccggaaacatctacgtgggcgggcagttcaaccgggtttcc
gacggtccgggtgggccatttcagccgtggaacaatctcatccggttgaaaagcgacggg
acgattgacccgctgtttgctccgggggctgggctgacaagctatgcgccggggtatccc
gtgatgcgtctgggcggcccaaccggctttggcaccgccggcgttggcttcacgacagtg
gatccccagacggcgctgccggctttgactggcaactgcgatgcgacgccgacgccgccg
gtgacggggacgggtgagaagttcaaccccaacgaagggcgcgtgaatgccatcgtgctc
cagcccaacgggcggattctcatcgggggcgagttcaagtgttacaacgggattccgcgg
ggtgggctggcgcggctgctgcccaacggctcactggacacgagctttggcgatccgctg
gcgccgctgcccggtgtggacgactattccctctgcgatgatccgattccaccacccggt
gtcccgcgcacgaatccggctgtggcctacaaccgggcgcgggtcaacgctatcctgctg
cagccggacggcagcgttgtcgtaggcggtctgttcggcaaggcgaacggtatagcgcgg
tacaatctggcgcggtttgacagcgccgggtttctggatttgaccttttcttcggggccg
accagcacggtcttcccgaccggaacggctggtgtgggcggtggtggcagcggtgccaca
tccaacggccgtggcggcgagattttcgccctggcacggcagagcctcggccccaatgcc
ggacggattctcgtgggtggtgtatttacaaccatcctcaaccagacaggcgctcctggc
aatttgccacgtacagccttcacgcgctttgagaccaacgggcggcacgatgccaccttt
gcgcagttgaactttacggcggcaggcactgtgcgggcgattgcgctgcaggccgatgac
cggccgatcattggcggttcgttccgcatcgggccgggtacggctggcggcacccagtac
acgagcaacaccacgcgggtgcgtgtcttccggtgtggggtcaacggggcctttacggat
acggtggacagcctgaacattccgcgttctagctggctggcggtgcaaccgccgcccgga
gtgacggtgcccttccagcccggaccctatgccgttcccggtgtgggttcgctggcgtcg
gtctttgctccaactgcaacgttgccagaaatcaactactatccgggcggttccgtctcg
ccggcttttggcacgggattcttcaacgcgaccaacgtggccatggcggtcaacaccatc
gcgcttgacccgacgcggcggcgggcctacatcggcgggctgttcaacgtctttgaatcg
gcacgggctgacttccagaacgacaatgccggcgctccgaacgggctgagcctcgacatc
cggtggcctggcgtggcggcactgcagacaggctgcacgtacggtctggtagcgccgacc
ttcccgcccttcacggtgcttccagccggggggacggtcaatctgggggccatcaatccg
gcgggcggcaacctgacgattggctcgctgacccggagtgcggtgtcggtctgcgatgcg
ctgccgacggtctcgacaggctcgacctttgtgaccattgtcggtgtggtgccgcgcacg
gctggtccgggaccgagctttgcggacatcatcatcaacgtctcccccaacaacacaggg
gcgaaccggacgggttcggtgacggtgacgctgccgagtgaaaccagcacgtcgccaccg
ccgacgaccttcaccttcacccagggtccggcttcgggctgcacgtacacggcgacggct
gtgccggcgagcttccctgtggctggcggcacgggtcagttccagatcacgaccggtgcc
ggctgcacctggacgattacgggtctcccgacctggatttcggccagtccgttgagcggt
tccggttcgagcacggtgaacttcacggtggcggcaaacaccggcgcaccgcgttcggcg
acggtcacggtggccggacagaacatcaccatcacgcaggcgggcacctgcacgctgacg
ctcggcacggcgacaggcacttcgcttccggtgacgggcggcacgggcagcttcacggtg
acgacgctggccggctgcacgtacacggcgacgagcagtgcgccgtggctggtcatcacg
ggcggcgcgtcgggcggtccgacggggacggtgacgttctcggttgggcgcaacagcggc
gcggcgcggtcggcgaccatcacggtgacggcgccgggtgtgccagcgcagacggtgaca
gtgtcgcaggcgccggacttggccggcccggacacggtagggatgttccgttcgtcaaac
ggcttcttctacctgcgcttctcgaacacctccggcaatgccgataccgacttcttctat
ggtacggcgggtgacgtgccgctttcgggcgactgggatgcggacggcgtcacgaccatc
ggcatcttccggaacggtcagttcttcctgcgcaacagcaacacggcgggctttgcggat
gtgccggcctttgccattagcggcacgcagccaggggatattccgctggcgggcgactgg
gatggcaacggctcgacgaccgtggggctgttccgggcaggggtcttcctgctgcgcaac
agcaacacggcgggtccggcggatgtggtcatcaactacgcgctgccgaccgatacgccc
atcgtaggcgactgggacggtgatggtgtgacgaccattggtctgttccgggcgagcgtg
gcgttcttcgggctgcgcaacagcaacacggcgggtccggccgacctgcagttcttcttc
ggtgcgccgaatgatgtgccggtggccggcgactgggacaacgatggtgtgacaaccatc
ggggtgttccgtgccgggacattcttcctgcgcaacagcaacacggccggtgttgccaat
ctgacggtcaactacggtctggcgacggaccgtccggtgattggccggtggcagtaa
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