Chloracidobacterium thermophilum: Cabther_A2102
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Entry
Cabther_A2102 CDS
T01629
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ctm
Chloracidobacterium thermophilum
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctm03016
]
Cabther_A2102
Enzymes [BR:
ctm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Cabther_A2102
Transfer RNA biogenesis [BR:
ctm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cabther_A2102
Prokaryotic type
Cabther_A2102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AEP12844
UniProt:
G2LJF5
LinkDB
All DBs
Position
1:2496346..2497134
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AA seq
262 aa
AA seq
DB search
MPRLKLTVEYDGTEYAGWQAQANARSIQAVLAAAFTPLLGQPAQLHAAGRTDAGVHALGQ
VVHTDVHQMRAPETWRAALNAHLPPDIRVRQVEVVGADFHARKSARGKLYHYAFWCGRVE
STRWRRYSLHVPQPLDWEAMREAAQHFVGRHDFAPFSVADRTVQTTVRTIHWVTWHGVSA
PGGSAQDGSGNASFSPPELLAVAFYGDGFLRYQVRRMVGTLLAVGQGKLPPTAVAGILCG
AKEFAAAATAPAQGLTLMQVDY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctaaagctgacggttgagtacgacggcacggagtacgccggctggcaggcg
caggcgaatgcccgcagcattcaggcggtgctggcggccgctttcacacccctgctgggc
cagccagcacaactccacgcggccgggcgtacggatgccggagtccatgctctggggcag
gttgtccatacggatgtccatcagatgcgcgccccggaaacctggcgcgcggcgctcaac
gcccaccttccgccggacattcgggtgcggcaggttgaggtggttggtgctgattttcac
gcccggaagtcggcgcggggcaagctctaccactatgcgttctggtgtggacgggtcgaa
agcacgcggtggcggcgctacagcctgcacgttccccagccacttgactgggaagccatg
cgggaagcggcgcagcactttgtcggacgccacgactttgcgcccttcagcgtggccgac
cggacggtgcagactacggtgcgtacgattcactgggtgacgtggcatggggtctccgct
ccgggaggctcagcccaggatggctccggcaatgcttccttcagcccgccggaactgctg
gccgtggcgttttacggagacgggtttctgcggtatcaggtacggcgcatggtaggcacg
ctgctggccgtggggcagggcaagctgccgccgacggccgtggccgggatactttgtgga
gcaaaggagtttgccgctgctgccacggcgccagcccaaggcttgacgctcatgcaggtt
gattactag
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