Chloracidobacterium thermophilum: Cabther_B0302
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Entry
Cabther_B0302 CDS
T01629
Name
(GenBank) Superfamily II DNA/RNA helicase, SNF2 family
Organism
ctm
Chloracidobacterium thermophilum
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SWIM
Motif
Other DBs
NCBI-ProteinID:
AEP13304
UniProt:
G2LKU9
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Position
2:complement(366824..370180)
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AA seq
1118 aa
AA seq
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MNRSTPSALPVAPVSSRPGDGAAHSVSQRIAEAFAPEVRERGEALLREGRVTAVEAQGDT
ITANVRGRMTYRVELLHDDDVLVVSCTCPYFEEGQVCKHIWATVRLAEEQKRLPAPPVNR
PFRLLMAELERPDEGDESDEETGGGLVSSRGDSAPAAISTTGWRRWFAQLGQQARLAATD
VAEQEILYLVNMARTLAHGMLVVDVFSRTRKLDGEWGRLRASGLTVGQIATLPDERDRQA
LALLSGIREHVDWEQAMDAAPVPSSVRIPTTALTVVMPLLCATGRCWLQMADEADAPAQV
VQRPPLRWEPEGWRMQLEVQRVETPPHYVLVGGLRRGEEWLPLSAPRLLLAGGLVFSEVS
VAPLQDEGAFYWIGLLRRSEAVRIPLEDGPDLVEKLLRLPTLPPVTLPEDLRFETCQGQP
LPVLRLRAGEGRPGEGWLGATLGFEYEGHWLEATSVQPGIFDAPRRRFIRRDLVRERAAA
EQLRALGLRPDRSQAGTPEYRVPVKRLPALVRDLVLQGWRIESEGRLFRPLQSFALEVRS
GVDWFELHGNCDFGTATAHLPELLRALRQGETVVPLSDGSLGVLSEEWFERYGFLATLGE
VEDGHLRFSSAQISLLDTLLAAQPEVRVDARFQALREQLHRFSGVEPALEPPGFVGELRP
YQREGLGWLLFLQRFGFGGCLADAMGLGKTAQTLALLETRRVRRQTEGLPPSLVVAPRSL
VFNWRQEAGKFTPRMRVLEHTGVGRARSIEQFADYDLILTTYGTLRRDILLLKDFAFDYV
ILDEAQAIKNARSESAKAARLLNCRHRLALSGTPVENHLGELWSLFEFLNPGMLGAASVF
QLTASGGRTVDAELQPLLARALRPFILRRTKEQVARDLPPKTEQTIYCEMEPEQRQAYNE
LRDHYRRTLLGLVDTKGLQRTRLQILEALLRLRQAACHPGLLDPARADGPSAKLDTFFMH
LAEVLESGSKVLVFSQFTSLLALIRKRLDADGITYEYLDGRTRNRQERVERFQQDPNCQL
FLISLRAGGQGLNLTAAEYVFLLDPWWNPAVEAQAIDRAHRIGQVRPVFAYRLIVRDTVE
EKVLELQATKQELADAIITADNSLLRQLERADLELLLS
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttccacgccgtccgccttgcccgtcgcgcctgtttcttcccgtccgggagat
ggggctgcccattccgtttcgcagcggattgccgaagcctttgcgccggaggtgcgcgag
cgtggcgaggcactgctgcgtgaaggccgggtgacagccgtcgaagcccagggcgacacg
ataacggccaacgttcgggggcggatgacctaccgggtcgagctgctgcacgacgatgat
gtgctcgtcgtgtcctgtacctgcccctatttcgaggaagggcaggtttgcaagcacatc
tgggcgacggtacgcttggccgaggagcagaagcggctacctgcgccaccggtcaaccgg
ccctttcggctgttgatggccgagctggagcgcccggatgaaggcgatgagtcggacgag
gaaacgggtggtggcctggtgtcttccaggggggacagcgccccggctgccatctccacc
accgggtggcggcgctggtttgcccaacttggacagcaggcccgtctggccgctacggat
gtcgccgaacaggaaattctctacctcgtcaacatggcgcggacactcgcccacggcatg
ctcgtcgtggatgtgttttcgcgcacacgcaaactcgatggcgaatggggccggctgcgg
gcgtcaggcctgaccgtcggccagattgcgaccctgcccgatgagcgggaccggcaggca
ctcgccctgttgagcggcattcgggagcatgtggactgggagcaggcaatggatgcagca
ccggtgccgtcatcggtgcgaattcccaccacggcgttgacggtcgtcatgccgctgctg
tgcgccaccgggcggtgctggttgcagatggcggatgaggccgacgccccggcgcaggtc
gtgcagcgtccaccgctgcggtgggagccggaagggtggcggatgcagcttgaggtccag
cgggtggaaacgccgccgcactacgtgttggtcggcgggctgcgccggggggaggaatgg
ctgccgctgtcagcgccccggctgctgctggccggcggcctggtgttctcggaggtctcc
gttgcgccgctccaggatgaaggtgctttctactggattggtctgctgcgcaggtcagaa
gccgtgcggattccgctcgaagacggccccgacctggtggaaaagctgttgcggttgccg
acgctgccgccggtgacactgccggaagacctgcggtttgaaacctgccaggggcagccc
ctgccggtgctgcggctgcgggccggtgaagggcgtcccggtgagggctggttgggggca
acgttgggttttgagtacgaaggtcactggctggaagccacaagcgtccagccgggcatc
tttgatgctccccggcggcgcttcatccggcgcgatcttgtccgggaacgggcggcggct
gagcagttgcgagcgttgggtctgcgcccggaccgcagtcaggcgggaacgccggaatac
cgggttccggtcaaacgtctgccggcgctggtgcgcgacctggtgctgcaggggtggcgg
attgagtcggaagggcgtttgtttcgtccacttcagagttttgcgctggaagtccgttcc
ggggtggactggttcgagctgcacggcaactgtgattttggaacggcgacggcccacctg
ccggaactcctccgggcgttgcggcagggggagacggtggtcccgctgtccgatggctcg
ctgggtgtactgtctgaggaatggttcgagcggtatggctttctggcgacgctgggcgaa
gtggaagacggtcatctgcggttttccagcgcccagatcagcctgctggataccctgctg
gcggcacagccggaagtgcgggtggacgcccgctttcaggcgctgcgtgaacaactgcac
cgtttcagcggtgttgagccggcactggaacctcccggttttgtcggcgagttgcgtccc
taccagcgggaagggctgggctggctgctgtttctgcagcggtttgggtttggcggctgt
ctggccgatgccatgggactggggaaaacggcgcagaccctggcgctgctcgaaacccgg
cgggtacggcggcagaccgaaggcctgccgccctcgctcgtggtggcaccccggtcgctg
gtgttcaactggcggcaggaagccgggaagttcacaccccggatgcgggtgctggaacac
accggcgtgggtcgggcgcgctccattgagcagtttgctgactacgatctcattctgacg
acctacggcacgctgcgccgcgacattctgctgctcaaggactttgctttcgattacgtc
atcctggacgaagcccaggccatcaagaatgcccgcagtgaatcggccaaggccgcccgc
ctgctcaactgccgccaccggttggcgctgagcgggacgccggtagagaaccacctgggg
gagttgtggagtctgttcgagtttctcaatccgggcatgctcggcgcggcctcggtgttt
caactcacggcgtccggcgggcggacggtggatgccgagctgcaaccgctgctggcccgc
gcgctgcggcccttcatcctgcgccgcacgaaagagcaggtggcgcgtgacctgccgccc
aagaccgagcagacgatttactgcgaaatggaacctgagcagcgccaggcgtacaacgaa
ctccgtgaccactaccgccggaccctgctgggcctggtggataccaaagggcttcagcgc
acgcgccttcagattctggaagcgttgctgcggctgcggcaggcagcctgtcatccggga
ctgctcgacccggcgcgggcagatggaccaagcgccaagctggatacgttttttatgcac
ctggcggaagtgctcgaaagtggctccaaggtactggtcttctcgcagtttacaagcctg
ctggcgctgattcggaagcgcctcgacgccgacggcatcacctacgaatacctcgatggg
cgcacgcgcaatcgccaggaacgggtggagcgtttccagcaggacccgaactgtcagctt
tttctcatcagcctgcgggctggaggccagggcctcaatctcacagcggcggagtatgtg
tttttgctcgatccgtggtggaatccggccgtagaggcccaggccattgaccgcgcgcac
cggattgggcaggtgcgcccggtatttgcctaccggctcatcgtccgggataccgtcgag
gaaaaagtcctggagttgcaggcgaccaagcaggagcttgccgacgccatcattacggcc
gacaatagccttctgcgccagctcgaacgcgccgaccttgaactgttgctttcataa
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