KEGG   Candida tropicalis: CTRG_00129
Entry
CTRG_00129        CDS       T01115                                 
Name
(RefSeq) ATP-dependent RNA helicase SUB2
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
ctp  Candida tropicalis
Pathway
ctp03013  Nucleocytoplasmic transport
ctp03015  mRNA surveillance pathway
ctp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CTRG_00129
  09122 Translation
   03013 Nucleocytoplasmic transport
    CTRG_00129
   03015 mRNA surveillance pathway
    CTRG_00129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctp03019]
    CTRG_00129
   03041 Spliceosome [BR:ctp03041]
    CTRG_00129
Enzymes [BR:ctp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CTRG_00129
Messenger RNA biogenesis [BR:ctp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CTRG_00129
Spliceosome [BR:ctp03041]
 Complex C
  Other components
   EJC/TREX
    CTRG_00129
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CTRG_00129
SSDB
Motif
Pfam: Helicase_C DEAD Cas3-like_C_2 CMS1
Other DBs
NCBI-GeneID: 8298206
NCBI-ProteinID: XP_002545348
UniProt: C5M240
LinkDB
Position
Unknown
AA seq 290 aa
MPDVKTDVFYGGIPIKRDIEKLKNKDTCPHIVVATPGRLHALVEEKAIRLNNVKSFVIDE
CDKVLESIDMRRDVQDIFRATPHQKQVMMFSATLSQEIRPVCKKFMQNPLEIYVDDEAKL
TLHGLQQYYIKLDEKEKNRKLSDLLDSLEFNQVIIFVRSTQRANELNKLLCACNFPSIAV
HSGLPQEERIERYKSFKEFNKRICVSTDVFGRGIDIERINLAINYDLPNEADQYLHRVGR
AGRFGTKGLAISFVSSKEDEEVLEKIQSRFDVKITDFPEEGVDPSTYMNT
NT seq 873 nt   +upstreamnt  +downstreamnt
atgccagacgttaagactgatgtcttttacggtggtattccaattaagagagacattgaa
aaattaaagaacaaagatacttgtccacatattgttgttgctaccccaggtagattacat
gctttagttgaagaaaaagccatcagattaaacaatgtcaaatcatttgtcattgatgaa
tgtgataaagttttagaatccattgacatgagaagagatgttcaagatatcttccgtgcc
actccacatcaaaaacaagttatgatgttttccgctactttatctcaagaaattcgtcca
gtttgtaagaaattcatgcaaaacccattggaaatttacgttgatgatgaagctaaattg
actttacacggtttacaacaatactatatcaaattggatgaaaaagaaaagaacagaaaa
ttgtctgatttgttggactctttggaatttaaccaagttattattttcgttagatccact
caaagagccaatgaattgaacaaattgttgtgtgcttgtaacttcccatctattgctgtt
cactctggtttaccacaagaagaaagaattgaaagatataaatcattcaaagaattcaac
aagagaatttgtgtttctactgatgttttcggtagaggtattgatattgaaagaatcaac
ttggctatcaactatgatttgccaaatgaagctgatcaatacttgcacagagttggtaga
gctggtagatttggtactaaaggtttggccatttcttttgtttcttccaaagaagatgaa
gaagttttagaaaagattcaaagtagatttgatgttaaaattaccgatttcccagaagaa
ggtgttgatccatctacttatatgaacacttaa

DBGET integrated database retrieval system