Candida tropicalis: CTRG_00132
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Entry
CTRG_00132 CDS
T01115
Name
(RefSeq) exosome complex exonuclease RRP41
KO
K11600
exosome complex component RRP41
Organism
ctp
Candida tropicalis
Pathway
ctp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTRG_00132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_00132
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CTRG_00132
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
CTRG_00132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
INTS7_C
Motif
Other DBs
NCBI-GeneID:
8302159
NCBI-ProteinID:
XP_002545351
UniProt:
C5M243
LinkDB
All DBs
Position
Unknown
AA seq
240 aa
AA seq
DB search
MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVVCTVQGPIEPQLRS
QQHSEHANIEINLTIANFATFERKKRNKNEKRLIELKNILEKTFMESIMINLYPRTNIII
NIQVLSQDGGLLSAITNSITLALIDSGISMYDYVSSINCGLYDTTPLLDLNNLEENDISN
LTIGVIGKSEKLALLLSEDKMPLDRLENVLSLAIAGSHRIRDLMDQEVRKHGNMRALKMK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtattcacctgaaggattaagaattgatggaagaagatggaatgaattacgt
agatttgaatgtcgaatcaatacgcatccaaattcatcagatggatcatcatatgttgaa
caaggaaatactaaagttgtttgtacagtacaaggaccaattgaaccacaattaagatca
caacaacattcagaacatgcaaatattgaaattaatttaactattgctaattttgctaca
tttgaaagaaagaaaagaaacaagaatgaaaaaagattaattgaattgaaaaatatttta
gagaaaacatttatggaaagtataatgataaatttatatccaagaacaaatataattata
aatattcaagttttaagtcaagatggtggattattatcagcaattacaaattcaataact
ttagctttaattgattctggtatttcaatgtatgattacgtaagtagtataaattgtgga
ttatatgatactacaccattattagatttaaataatttagaagaaaatgatattagtaat
ttaactattggagttattggtaaaagtgaaaaattggcattattattatctgaagataaa
atgcctttagatagattagaaaatgttttatcacttgctattgcaggtagtcatagaatt
agagatttaatggatcaagaagtaaggaaacatggtaatatgagagctcttaaaatgaaa
taa
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