Candida tropicalis: CTRG_00249
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Entry
CTRG_00249 CDS
T01115
Name
(RefSeq) predicted protein
KO
K15079
structure-specific endonuclease subunit SLX4
Organism
ctp
Candida tropicalis
Pathway
ctp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
CTRG_00249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctp03400
]
CTRG_00249
DNA repair and recombination proteins [BR:
ctp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
CTRG_00249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
IATP
Motif
Other DBs
NCBI-GeneID:
8297249
NCBI-ProteinID:
XP_002545468
UniProt:
C5M2G0
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MGISTIAVDLLNTHRTKSNKKKIARDENSTRQIQYTTNRSQHTHTHTHRQPTTMSPEGEE
SHAEDNLYFHNTQMQSIHEETLAEESHAQSIQRSISRLSSFKHEDTDSESPIPVQKVIRH
IKKTNTNTNTTKTKKRKLKVSKPRKNMSSSESVRQMYGSRKNGEQQGSIDGFLMSRFGDV
DGCNESDRSSKLISQGEWESLSKFHEESNEKDKLLRKKIQRYYSEPQEELGEGCGMLSQA
SADPETKMTKEELESLYDLDSSTVFNQTTISAIGDMSEPTQVSEPCVVILSQTKVQSEAS
TQEDGADASVQEIKSSVPTQELFSTPEFVPAPLEQPVNKEVCSDQSIVVLEENVQSTQAD
DSDIVELISDSDPEPEEVSTKVQVLRSIYDSSGPVNDKQPSVASETVESDSTPIVSPVKT
PQGTRMHVVQVASSNPSSPIKIVEENTEQQEEVFTDVESIYSTARTSFGTPKHTSPVILL
ESSDTDCDDNDNDVEPLSSMPMVKTVPKKRMRTTVLQVSAALKVQNYTDEKNNIKLRKIG
DDIPVEVPTKDVEYEEIPDSQESVGGEGDNSVSIIEITREVHNNDYTGDESTDLFQVGLN
KQDTCEDTSSPVVQIGGVENDILDSSLIEPVPEPESVPVPEEVQEQPQPTAIDKHTATQL
REKFQLWGLKPVRGKEKMVEILQGISNFILPEHELLAVADKQELQSCIFMKLDAVIREGR
AMYDRILSFEPIRIEELQMMLQSQDYYLELDVLRLYCDSSGITTTNA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggcatatccacaatcgcggtggatttactaaacacacacagaacaaaatcaaacaaa
aaaaaaatagcacgcgatgaaaactccacacgtcaaatccaatacaccacgaatagatca
caacacacacacacacacacacacagacaaccgaccacgatgagtcccgaaggggaagag
ctgcatgcagaagataatttgtatttccacaatacacaaatgcagagcatacacgaggag
acactagcagaagaatcacacgcacagtccattcaaagatcaatatcgcgtctaagtagt
ttcaaacatgaagacaccgactcagaatcacctatccccgtacagaaggtaatacgacat
atcaagaagacaaatacaaatacgaacaccacaaagacgaaaaagagaaagctcaaagtg
tctaaaccacgcaagaatatgtccctgagtgaatcggtgcgacagatgtatggatcacga
aagaatggagaacaacagggtagtattgatgggtttttgatgagccgatttggcgatgtg
gacggttgcaatgagagtgatcgaagttctaaattgataagtcagggagaatgggaatca
ttgagcaagttccacgaggagtcgaacgagaaggataaattgttgaggaagaagatacaa
cggtattacagtgaaccgcaagaggaactaggagaagggtgtgggatgttgtcacaagca
tcggcggatccggagaccaagatgaccaaagaggagctcgagagtttgtatgatctcgat
tcaagcacggtgtttaatcagaccactattagtgctattggggatatgctggagccaaca
caagtgtctgaaccgtgtgtggttattctatcacagacaaaggttcagtcagaagcactg
acacaggaggatggtgctgatgcgtcggtacaggagattaaatcatctgttccaacacaa
gagctattcagtactccagagtttgttcccgcaccactcgaacagccagtgaacaaggag
gtgtgttcggatcagctgatagttgtgcttgaagagaatgtgcaatccacacaagcagac
gacagtgatattgttgaactcatcctggactctgatcctgaaccagaggaagtgagtaca
aaagtacaagtattgcgatcgatctatgattcttctggaccagtaaacgacaaacagcca
tcagttgctagtgagacagttgagagtgactcgactcctattgtatcacctgtcaagaca
ccacaagggacaaggatgcatgttgtgcaagtcgcaagtagtaatccactgagtccaatc
aagattgtcgaagaaaacacagagcaacaagaggaagtgtttactgatgtggagtctata
tattccacggccaggacttcatttggcacaccaaaacacacgtcgccggttatcttgcta
gaactgagtgataccgattgtgatgataatgataacgacgtggagccattatcgtccatg
ccgatggtgaaaactgtgcctaagaagcgaatgagaacaacggtgttgcaggtgtcggct
gcattgaaagtacagaactatactgatgagaaaaacaacatcaagctacgcaagatcgga
gacgacattccagtggaagtgccaaccaaggacgttgagtacgaagagatacctgattcg
caggagctggtaggtggtgaaggagacaatagtgtgagtatcattgagatcacgagagag
gtgcacaataacgattacactggtgatgaaagcactgatttgtttcaagttgggctcaac
aagcaggatacgtgcgaagacacatccagtcctgtggtccagataggtggtgtcgaaaat
gatatacttgattcatccttgattgagcctgtacctgaacctgaatctgtacctgtacct
gaagaggtgcaagaacaaccacagccaactgcaatagacaaacacactgctacgcagctt
cgagaaaagttccaattatggggattgaaaccggttagaggtaaagagaaaatggtggag
attttacaagggatatccaatttcattctacctgagcatgaacttcttgctgtggctgac
aaacaagaattgcaatcgtgtatatttatgaaactagacgcggtcatccgggagggtcga
gccatgtacgatagaatactttcgtttgagccgattcggattgaggagctccagatgatg
ttgcaatcacaagactattatttagaactagatgtacttcgtttatactgtgactcgtct
ggtatcacgacaaccaatgcatga
DBGET
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