Candida tropicalis: CTRG_00257
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Entry
CTRG_00257 CDS
T01115
Name
(RefSeq) predicted protein
KO
K15079
structure-specific endonuclease subunit SLX4
Organism
ctp
Candida tropicalis
Pathway
ctp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
CTRG_00257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctp03400
]
CTRG_00257
DNA repair and recombination proteins [BR:
ctp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
CTRG_00257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
Motif
Other DBs
NCBI-GeneID:
8300622
NCBI-ProteinID:
XP_002545476
UniProt:
C5M2G8
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MSPEGEESHAEDNLYFHNTQMQSIHEETLAEESHAQAIQRSISRLSSFKHEDTDSESPIP
VQKVIRQIKKTNTNTNTTKTKKRKLKVSKPRKNMSSSESVRQMYGSRKNGEQQGSIDGFL
MSRFGEVDGCNESDRSSKLISQGEWESLSKFHEESNEKDKLLRKKIQRYYSEPQEELGEG
CGMLTQASADPETKMTKEELESLYDLDSSTVFNQTTISAIGDMSEPTQVSEPCVVILSQT
KVQSEASTQEDGADASVQEIKSTVPAQELFSTPEFVPAPLEQPVNKEMCSDQSIVVLEEN
VQSTQADDSDIVELISDSDPEPEEVSTKVQVLRSIYDSSGPVNDKQPSVASETVESDSTP
IVSPVKTPQGTRMHVVQVASSNPSSPIKIVEENTEQQEEVFTDVESIYSTARTSFGTPKH
TSPVILLESSDTDCDDNDNDVEPLSSMPMVKTVPKKRMRTTVLQVSAALKVQNYTDEKNN
IKLRKIGDDIPVEVPTKDVEYEEIPDSQESVGGEGDNSVSIIEITREVHNNDYTGDESTD
LFQVGLNKQDTCEDTSSPVVQIGGVENDILDSSLIEPVPEPESVPVPEEVQEQPQPTAID
KHTATQLREKFQLWGLKPVRGKEKMVEILQGISNFILPEHELLAVADKQELQSCIFRKLD
AVIREGRAMYDRILSFEPIRLEELQSMLQSQDHYLELDVLRLYCDSSGITTTNA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccgaaggggaagagctgcatgcagaagataatttgtatttccacaatacacaa
atgcagagcatacacgaggagacactagcagaagaatcacacgcacaggccattcaaaga
tcaatatcgcgtctaagtagtttcaaacatgaagacaccgactcagaatcacctatcccc
gtacagaaggtaatacgacagatcaagaagacaaatacaaatacgaacaccacaaagacg
aaaaagagaaagctcaaagtgtctaaaccacgcaagaatatgtccctgagtgaatcggtg
cgacagatgtatggatcacgaaagaatggagaacaacagggtagtatcgatgggtttttg
atgagccgatttggcgaggtggacggttgcaatgagagtgatcgaagttctaaattgata
agtcagggagaatgggaatcattgagcaagttccacgaggagtcgaacgagaaggataaa
ttgttgaggaagaagatacaacggtattacagtgaaccgcaagaggaactaggagaaggg
tgtgggatgttgacacaagcatcggcggatccggagaccaagatgaccaaagaggagctc
gagagtttgtatgatctcgattcaagcacggtgtttaatcagaccactattagtgctatt
ggggatatgctggagccaacacaagtgtctgaaccgtgtgtggttattctatcacagaca
aaggttcagtcagaagcactgacacaggaggacggtgctgatgcgtcggtacaggagatt
aaatcaacagttccagcacaagagttattcagtactccagagtttgttcccgcaccactc
gaacagccagtgaacaaggagatgtgttcggatcagctgatagttgtgcttgaagagaat
gtgcaatccacacaagcagacgacagtgatattgttgaactcatcctggactctgatcct
gaaccagaggaagtgagtacaaaagtacaagtattgcgatcgatctatgattcttctgga
ccagtaaacgacaaacagccatcagttgctagtgagacagttgagagtgactcgactcct
attgtatcacctgtcaagacaccacaagggacaaggatgcatgttgtgcaagtcgcaagt
agtaatccactgagtccaatcaagattgtcgaagaaaacacagagcaacaagaggaagtg
tttactgatgtggagtctatatattccacggccaggacttcatttggcacaccaaaacac
acgtcgccggttatcttgctagaactgagtgataccgattgtgatgataatgataacgac
gtggagccattatcgtccatgccgatggtgaaaactgtgcctaagaagcgaatgagaaca
acggtgttgcaggtgtcggctgcattgaaagtacagaactataccgatgagaaaaacaac
atcaaactacgcaagatcggagacgacattccagtggaagtgccaaccaaggacgttgag
tacgaagagatacctgattcacaggagctggtaggtggtgaaggagacaatagtgtgagt
atcattgagattacgagagaggtgcacaataacgattacactggtgatgaaagcactgat
ttgtttcaagttgggctcaacaagcaggatacgtgcgaagacacatccagtcctgtggtc
cagataggtggtgtcgaaaatgatatacttgattcatccttgattgagcctgtacctgaa
cctgaatctgtacctgtacctgaagaggtgcaagaacaaccacagccaactgcaatagac
aaacacactgctacgcagcttcgagaaaagttccaattatggggattgaaaccggttaga
ggtaaagagaaaatggtggagattttacaggggatatccaatttcattctacctgagcat
gaacttcttgctgtggctgacaaacaagagttgcaatcgtgtatatttaggaaactagac
gcggtcatccgggagggtcgagccatgtacgatagaatactttcgtttgagccgattcgg
cttgaggagctccagctgatgttgcaatcacaagaccattatttagaactagatgtactc
cgtttatactgtgactcgtctggtatcacgacaaccaatgcatga
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