Candida tropicalis: CTRG_00282
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Entry
CTRG_00282 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
ctp
Candida tropicalis
Pathway
ctp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTRG_00282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctp03009
]
CTRG_00282
Ribosome biogenesis [BR:
ctp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CTRG_00282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EML
WD40_Prp19
Leo1
Motif
Other DBs
NCBI-GeneID:
8301160
NCBI-ProteinID:
XP_002545501
UniProt:
C5M2J3
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MPSANSDWSLSMATGGKPVFLPYSQASASVYSSDGRYIIIALAHQLRVYFISTRQCIKTI
DLNLEDLVDIKLDVTNMNQVLLFKSSGELVTVNWKDKVSQPIVSNINIKSNLPILSVISV
KHLSFIIITGRIDKKKNGSSPHTRYINYFDRNQETLTPIIEVSNSINFAVSLDNSKIAFV
TSDNEVNLFDLSDIYKLDNIENLKDDDISNEIIPFVYKSAITAIAVSNDSIVALGTTSGP
IQIVYGGLITPKPQRVLKWHLDQVKSLCFTEDNNYLLSGGMEKVLVFWQLETEKKQFLPR
LNGTIEKISIDTHKNDYISLELRVDSIDNIHEILVISAIDLVSRLSVNTIRPRFAHNIKN
TINKTKKKYTKNSSDFDKLKIRYDYSCNFEINPKTKNLYFPNDSSIQAFDLFKNEQVFIQ
HAAPVLNVGKVRSETKLLDPSVTLLKFTHDGEWMCTFDEFKNTEVDDLLLKNEKQYALKF
WKFIENKDNTSTAATPGNSSKTGHWELTTKIIDPHGNNPILSMIPAPTSYFNGLAFLTAD
NKGGLRIWRPSFPKEAYKTSSQRSQQTAWTLRKSRSPGALSSEAVALSWSDDSSLIFLGH
ECTITTINSKTLEDTPDFKIPSLSGSRVRSLNLVDNNLVVLSKTRISSFDLISGELTGLV
AKVNTTYGGKNLIAIDPVKKLICLALNYYDTTATDNNDNEKFTIKSKILIFKPNQLKPIS
VQYHDTGVSSIRYFNSSFIFVDLDCRVGTIYNNATDDITDAVEIGLTQEINNMLITAQAT
ADVINDRNVEVKVGKQNKADDGMDIDDGLQYSQKVIDLHTFQPIFQNIEGVQIESLFDRI
VNVLK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtgccaattcagactggtcattatctatggctactggtggtaagccagttttc
ttgccttattctcaagcatcagcatccgtgtactccctggatggtagatacatcattatt
gcattggctcatcaattacgagtttattttatttccactagacaatgtatcaaaactatt
gacttgaatttggaagacttggtagatataaaattagatgttactaatatgaaccaagta
ctattatttaaaagttcaggagaattggtcacagttaattggaaggataaagtttcacaa
ccaattgtatccaacataaacatcaaatctaatttacctattttatcggtcatttcagta
aagcatttatcatttattattattactggtagaatcgacaagaagaaaaatggaagctca
ccacatactcgttacattaactattttgatagaaatcaggaaactttgactccaataatt
gaagttagtaactctattaactttgctgtttctttagataattctaaaattgcttttgtc
accagtgacaacgaagttaacttgtttgatttatctgatatttacaaacttgacaatatt
gaaaacttgaaagatgatgacatttctaatgaaataatcccatttgtttataagtcagca
atcaccgctattgctgtctccaatgattccattgtcgcacttggtacaacatcaggtcca
attcaaatagtttatggtggtttaattacaccaaaaccacaaagggtcttgaaatggcat
cttgatcaagttaaaagtttatgtttcaccgaagacaacaactatttactttcaggtggt
atggaaaaagtattggttttctggcaattggaaactgagaagaaacaattcttacctcgt
ttgaatggtaccattgaaaagatttctattgatactcacaagaatgattacatttcatta
gaattaagagttgatagcattgataacatccacgaaattttggttatatctgccattgat
ttggtttctagattatctgtaaacaccattcgcccaagattcgctcacaatatcaaaaac
actatcaacaagaccaagaagaagtatactaaaaattcgtctgattttgataaattgaaa
atcagatacgactacagttgtaactttgaaatcaatccaaagaccaaaaacttgtatttc
ccaaatgattccagtatccaagcttttgatttattcaagaatgaacaagtattcattcaa
catgctgctccagtcttgaatgtcggtaaggttagatcagaaacaaaattattggatcct
ctggtcactctattgaaatttactcatgatggtgaatggatgtgtacatttgatgaattc
aaaaatactgaagttgatgatttattattgaagaatgaaaaacaatatgctttaaaattc
tggaaattcattgaaaataaagacaatacttcaactgctgctactcctggtaattcaagt
aaaactggacattgggaattaactaccaaaattatagatcctcatggaaataacccaata
ttatccatgattccagctccaacttcatatttcaatgggttggcatttttaactgctgat
aataaaggtggtttaagaatatggagaccaagtttccctaaagaagcttataaaacctca
tcacaaagatctcaacaaactgcatggacattaagaaaatcaagatctcctggtgcttta
tcttctgaagctgttgcattaagttggtcagatgatagttctttgatcttcttgggtcat
gaatgtacaataactacaatcaattccaaaaccttggaagatactcctgattttaaaatc
ccatcattatcaggttccagagttagatccttgaaccttgttgataataatcttgttgtt
ttatccaagacaagaatttcctcatttgatttaatttctggtgaattgactggtttggtt
gcaaaagtgaatacaacttatggtggtaaaaatttaattgccattgatcctgttaagaaa
ttgatctgtttagcattaaattattatgatactaccgccacagataataatgataatgag
aaatttactattaaatcaaaaatcttaatttttaaaccaaatcaattgaaaccaatatct
gttcaatatcatgatactggagtatcatcaatccgttattttaattcatcatttatattt
gttgatttggattgtcgagtaggaactatttacaataatgctactgatgatatcactgat
gctgttgaaattggtttaacacaagaaatcaacaatatgctaataactgcacaagcaact
gctgatgtaataaacgatagaaatgtcgaagttaaagttggtaagcaaaataaagcagat
gatggcatggatatagatgatggattacaatatagtcaaaaagtcattgatcttcatact
ttccaaccaattttccaaaatatcgaaggtgttcaaattgaatcattgtttgatcgtata
gttaatgtacttaaatag
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