Candida tropicalis: CTRG_00315
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Entry
CTRG_00315 CDS
T01115
Name
(RefSeq) predicted protein
KO
K18717
nucleoporin ASM4
Organism
ctp
Candida tropicalis
Pathway
ctp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTRG_00315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_00315
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CTRG_00315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
8297631
NCBI-ProteinID:
XP_002545534
UniProt:
C5M2M6
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MSTLFGAKPAQTNTFVSPFGVNQSQQQQQQQQQPQPSQQQALQPQSQSIQQSQVGTQQLN
HQNQQQQPTWFQNQKKRTIPNHLVPKKKPSFHLGANNNNSKNKKSNALHPSLISDDQFNL
LSFGTNNRKTITGPLLDKNTSVGSLFDLQLSNNTTIGDLTKIDETFDGSTDHIDSDLPPK
KSMFDLGTESAKILTSDAKLDSFIHKDPKAFTNIFNRSSDLDGSKVEQSAEDKDPAKINH
LKNYNSAIIVFGYPESLSLEIIKFFESFGKILEDFDNGSRNMNSTLLNLSTSQNSTNGKI
IPIFSGKHWIKLTYDNPNSALQALQENGNVFNGSMIGVVPYHKSIIEKLEKKQIFANDDI
GGGDLDIPLDKVYEIINKQSKAVNSQDIGNSTQPNGESATSSNNSYMNKLDIKPADDHFF
LKSDQNGDKSKTVKANETKDHEKLGILGTISKYVFGFHDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacattatttggtgcaaagccagctcaaaccaatacatttgtgagtccatttgga
gtaaaccagtcacaacaacagcagcaacaacaacaacaaccacagccatcacaacaacaa
gcattacagccacaatcacaatcaattcaacagtcccaagtcggtactcaacaacttaac
catcaaaaccaacaacaacagcctacatggtttcaaaaccaaaagaaaagaaccattcct
aatcatttagtaccgaagaaaaaaccaagtttccatcttggtgccaataacaataattca
aagaataaaaaatcgaatgctcttcatccatctttgatttcagatgatcaattcaattta
ttatcttttggaactaataaccgcaagactataactggtcctcttttagataaaaatacc
agtgttgggagtttatttgatttacaactcagtaataacacaacaattggcgatttgaca
aaaatagatgaaacatttgatggatctactgatcacattgacagtgatcttccaccaaag
aaatccatgtttgatttgggtactgaatccgctaaaattttaacttctgatgctaaactt
gattcatttattcataaggatccaaaagcttttaccaacatctttaatagatccagtgat
cttgacggaagtaaggttgaacaaagtgctgaagataaagaccctgcaaagattaatcat
ttgaaaaactataatctggcaatcattgtttttggatatcctgaaagtttatcccttgaa
attattaaattctttgaaagctttggtaaaattttggaagattttgataacggtagtagg
aatatgaattcaactttgttaaatttgagtacatctcagaactccaccaatggtaagatc
attcctattttcagtggtaaacattggattaaattaacatatgataatccaaactccgct
ttacaagctttacaagaaaatggtaacgtgtttaatggatctatgattggtgttgttcct
tatcacaaaagtataattgaaaaattagaaaagaaacaaatttttgctaatgatgacata
ggtggtggagacttggatattccattagataaagtttatgaaattataaacaaacaatcc
aaagctgttaattctcaagatattggaaattcaactcaacctaatggtgaatcagcaact
tcatcaaataattcttacatgaataaattggatataaaacctgccgatgatcattttttc
ttgaaaagtgatcaaaatggtgataaatcaaaaaccgtgaaagcaaatgaaactaaagat
catgaaaagttgggtattttaggaaccatatctaagtatgtctttggattccacgattta
taa
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