Candida tropicalis: CTRG_00369
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Entry
CTRG_00369 CDS
T01115
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
ctp
Candida tropicalis
Pathway
ctp03008
Ribosome biogenesis in eukaryotes
ctp03013
Nucleocytoplasmic transport
ctp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CTRG_00369
03015 mRNA surveillance pathway
CTRG_00369
03008 Ribosome biogenesis in eukaryotes
CTRG_00369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_00369
03009 Ribosome biogenesis [BR:
ctp03009
]
CTRG_00369
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CTRG_00369
mRNA cycle factors
Stress granule specific factors
CTRG_00369
Ribosome biogenesis [BR:
ctp03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CTRG_00369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
RRM_9
TAP_C
LRR_NXF1-5
LRR_4
LRR_9
HTH_57
LRR_8
Motif
Other DBs
NCBI-GeneID:
8302135
NCBI-ProteinID:
XP_002545588
UniProt:
C5M2T0
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MSYRGRGRGGGYNNNYNNYNHGNRNQYSSGSHQQNVDAFVTANQYPIEIMGWNGASSTEC
INFISRKCKVIVSNYSVDSNSGILKGYVKNESQANTLMDWSGVKFAGQSLRFSKGVSNLS
SQMGTSGGSGSGTGSTIETITQFLKSRYQPELRMLNLSNVKQDPSLNAQGFFGSISVSSK
FFPALMKVADDLKLDVITVDLSNNELQDLQTLTSMAQTFPRLQNLSLQNNNFSRIKVFET
WRHKLNFLRELILFNNPIVQTNNPTEIQNIKLELMKSFPRLVVLNGEVLRNEQALNSYLS
FPFPAQQSMFFQDDDSRNLATNFIANYIKLWDSNRAELMILYQNESQFSMQVDSSHPYLI
DSNSNNSTDFGYYLTNSRNLTRISSIKARMDKLATGQEQIYKAFQKLPKTRHELFEKPDL
FSMEVYKFPSLNGITITIHGSFEETAQPEVDGSMSSTPSGPRGGSRYHSAPKHKRIPLSK
KSFDRTFVVIPGPNGSMIVASDSLLIRPYTTKFPWDAESTANAQNPAVAGAAPAGAATNP
ATATATPTPPPQSQGGVTPSIQVVSPTPTAADLPAEIKARLNQVQQEILVKVLLETKLNI
NYGLMLLEQSNWDYQQASVNFKNSAASLPRDAFV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagttatagaggaagaggaagaggtggaggttataataacaactacaacaattataac
cacggaaacagaaatcaatactcatctggatcgcatcaacaaaatgtcgatgcctttgtc
actgcaaatcaatatcccattgaaatcatgggttggaatggagctagtctgactgaatgt
attaattttatttcccgtaaatgtaaagtgatagtttcaaattatagtgtggattcaaac
agtggtattttgaaaggttatgttaaaaatgaatcccaagcaaatacattaatggattgg
tcgggtgtaaaatttgctggacaatctttacgtttttccaaaggtgtttccaacttatct
agtcaaatgggtacttcgggaggttcaggttcaggtactgggtctacaattgaaacaatt
acccagtttttgaaatcaagataccaaccagaacttagaatgttgaatcttagtaatgtc
aagcaagaccctagtttgaatgctcaaggattctttggatcaatttcagtcagttcaaaa
tttttccctgctttaatgaaagtagcagatgatttaaaattagatgttattactgttgac
ttatccaacaatgaattgcaagatttacagacattaacttctatggctcaaactttccct
agactacaaaatctttctttacaaaacaacaatttttcaagaatcaaggtttttgaaaca
tggagacataaattaaactttttaagagaattgattttgtttaataatccaattgtacaa
acaaacaatccaactgagattcaaaatatcaaattggaattaatgaaatcattccctagg
ttggttgtcttgaatggggaagtgttaagaaatgaacaagcattaaattcatacttgtca
ttccccttcccagctcaacaatccatgtttttccaagacgatgattccagaaaccttgca
actaattttattgctaactatattaaattatgggattccaatcgtgctgaattaatgatt
ttataccaaaacgaatcacaattttccatgcaagtagactcatcacatccttatctcatt
gatagtaacagcaataattcaactgattttggttactatttaaccaattcaagaaacttg
acaagaatttcttccatcaaggcaagaatggacaaattggccactggacaagaacaaatt
tataaagcattccaaaaattaccaaaaactcgtcatgaattgtttgaaaaacctgatcta
tttagcatggaggtttacaaatttccgtcacttaatggtatcacaattaccattcatgga
agttttgaagaaaccgcccaacctgaagtagatggaagtatgtcatctacaccaagtgga
ccaagaggtggttcaagatatcattctgcaccaaagcacaagagaatacctttaagtaaa
aaatcatttgatagaacatttgttgttattcctggtccaaatggtagtatgattgttgca
agtgattccttgttgattagaccatatactaccaaatttccttgggacgctgaatccact
gccaatgcacaaaatccagctgttgctggagctgcccctgctggagcagcaaccaatcca
gctactgctactgctactccaacacccccaccacaatcacaaggtggagttactccatct
atacaagttgtttctcccaccccaacagcggccgatttgccagcagaaattaaagctaga
ctcaatcaagtacaacaagaaattttggttaaagttttattggaaacaaaattgaatatt
aattatggtctaatgttattggaacaaagtaattgggattatcaacaagcatcagtgaat
tttaaaaactcagctgcttctttaccaagagatgcatttgtatag
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