Candida tropicalis: CTRG_00410
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Entry
CTRG_00410 CDS
T01115
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ctp
Candida tropicalis
Pathway
ctp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CTRG_00410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctp03021
]
CTRG_00410
03036 Chromosome and associated proteins [BR:
ctp03036
]
CTRG_00410
Transcription machinery [BR:
ctp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CTRG_00410
Coactivators
SAGA/TFTC/STAGA complex
CTRG_00410
Chromosome and associated proteins [BR:
ctp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
CTRG_00410
STAGA complex
CTRG_00410
TFTC complex
CTRG_00410
SAGA complex
CTRG_00410
SLIK complex
CTRG_00410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_EIPR1
WD40_like
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_IP5PC_F
LisH
Ge1_WD40
RMC1_N
Beta-prop_Vps41
PEP5_VPS11_N
VPS8_N
Beta-prop_VPS8
Beta-prop_NWD2_C
DUF7165
Motif
Other DBs
NCBI-GeneID:
8298182
NCBI-ProteinID:
XP_002545629
UniProt:
C5M2X1
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MVGENKETPSNQTGSTTQGQTQSNSSNATQGTQPAQPTQQQQQSQQKPGGARPAQGRLNQ
AQYSQADLDRIVLEYLNKKGYHRTEAQLRLESSNIPTQSVPPATPATTTLATPSELTNND
NNKELKDKLTKSERELKELREKQAKIERELKETKDREVKAAKEKDLKELKELESKKKREN
NPEIYCTAYSMLRRWVDSSLDLYKPELARVLYPLFIHCFLELISKGFPNEAKDFFDKFKS
DHLILHGVEVKKFAGLSLPEHLEENDLATAYRKYKYRILVSKTSLNLLLYFLHENEAVGG
GILIRIINQYLDPVISTTRPDKIDQEGEANPEEGISKYVADTNEVEKFNEQTVKLGKMPI
DPEVSKEVEAELKLKDEKIESVNGKTLTEEFQEMIKPESDSPARESLPLPLKDANDIKKM
ILQVEDSRSKIKLGAIQASSPSVCMYTFHNTNNDMTCIEFNDDSTMAAAGFQDSYIKLWS
LDGKPLKSVLKRDRHKPQDNTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTY
TALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEF
HPNSNYVFTGSSDRTCRMWDVQTGNCVRVFLGHTNPVNCLAVSPDGRWLASGGEDGIICV
WDIGSGRRLKSMRGHARASIYSLAFSKDGTVLISGCADNSVRVWDVKKNTNDAGPEPEAF
VNNNNSNNGANSADGNQSSQNQQQQQQQQQQQPTKKESIATSDHMNAFFTKKTPVYKVHF
TRRNLCLAAGSFQG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggttggagaaaacaaagaaacaccatccaatcagactggatcaaccacccagggtcaa
acccaatcaaactcatctaatgcgacccaaggaactcaacctgcacaacctacacaacaa
caacaacaatctcaacaaaaacctggtggtgcacgtccggcccaaggtagattgaaccag
gcccaatattcacaagctgatttggatagaatagttttggaatatttaaataaaaaggga
taccatagaaccgaagctcagcttagacttgaaagttccaatatcccaacacaaagcgta
ccaccggcaactcctgcaacaacaactttggcaacacccagtgaattgacaaataatgat
aataacaaagagcttaaagataaattgacaaaaagcgaaagagagttgaaggaattgcgt
gaaaaacaggccaagattgaacgagaattaaaggaaacgaaagatcgtgaagtgaaagcc
gcaaaggaaaaggatttaaaggagttgaaggaattggaaagtaaaaagaaaagagaaaac
aatcctgaaatttattgcactgcctattcgatgttgagaagatgggtggattcttcgttg
gatttatataaacctgaattagcacgagttttgtatccgttattcatccattgtttcttg
gaattaatttctaaaggttttccaaatgaagccaaggattttttcgacaagttcaaatca
gatcacttgatcttgcacggtgttgaagtcaaaaagtttgcagggttatcattacctgaa
catttagaagaaaatgatttggctacagcttacagaaaatacaagtatcgtattttggtt
tctaaaacatcattaaacttgttgttgtattttcttcatgaaaatgaagccgttggtgga
ggtattttaatccgtataattaatcaatacttggatcctgttatttccactacaagacct
gataagatcgaccaagagggcgaagctaatccagaagaaggtatttccaagtatgttgct
gacactaacgaggttgaaaaattcaacgagcaaactgttaagttgggtaagatgcctatt
gacccggaggtttccaaagaagttgaagctgaattgaagcttaaagatgagaaaattgaa
ctggtgaatgggaaaacactaactgaagagttccaagaaatgatcaaacccgaactggac
ctgccggctagggaatccttgcctttacctttgaaggatgcaaatgacataaagaaaatg
attttgcaagttgaagattcccgatccaagattaaattaggtgccattcaagcaagttct
ccatccgtgtgtatgtacacgttccataacacgaataacgacatgacttgtattgaattc
aatgatgattctaccatggcagcagccgggttccaagatagttatatcaaattgtggagt
cttgatggtaagccgttgaaatcggtattgaagagagatagacacaaaccacaggacaat
acacgaaagttgattggtcacagtggtccagtgtacggggtttctttttcacctgacaac
aagtaccttttgtcgtgctccgaggacaagactgtcagattgtggtcattggacacatac
acggcattggtttcgtataaaggtcatactcagcctgtatgggatgttaaattttcacca
ttgggacattattttgtcactgcatcccacgatcaaactgcgagattatgggcaactgac
catatttacccattgcgtatatttgcgggccatattaatgatgttgattgtgttgagttc
catcctaactcgaattatgttttcactggttcaagtgatagaacatgtcgtatgtgggac
gtacaaacaggaaactgtgtgagagtattcttaggacatactaatccagtcaattgtctt
gctgtttctccagatggtagatggttggccagtggtggtgaagacggtataatttgtgtt
tgggacattggaagcggcagaagattgaagtccatgagaggacatgctagagcatcaatc
tactcattggccttttcaaaagatggtactgttttgatcagtggatgtgcagataatagt
gttagagtatgggatgtcaagaagaatacaaacgacgcaggtccagaacctgaggcgttt
gtcaataataataacagtaacaatggagcaaactcagccgatggcaatcaatcatcacaa
aatcaacaacaacaacaacaacaacaacaacaacaaccaaccaaaaaggagtcaattgct
acaagtgatcacatgaatgcattttttacgaaaaagactccagtgtacaaggttcatttt
acacgtcggaacttatgtcttgcggctggttcttttcaaggttaa
DBGET
integrated database retrieval system
