KEGG   Candida tropicalis: CTRG_00426
Entry
CTRG_00426        CDS       T01115                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
ctp  Candida tropicalis
Pathway
ctp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CTRG_00426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ctp03041]
    CTRG_00426
   03036 Chromosome and associated proteins [BR:ctp03036]
    CTRG_00426
Spliceosome [BR:ctp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CTRG_00426
 Complex B
    CTRG_00426
 Complex C
   U2 SnRNP specific factors
    CTRG_00426
Chromosome and associated proteins [BR:ctp03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    CTRG_00426
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N GNC1_N Htt_N-HEAT_1 XMAP215_CLASP_TOG HEAT_ECM29 Sec7-like_HDS SF3b1 MMS19_C
Other DBs
NCBI-GeneID: 8298989
NCBI-ProteinID: XP_002545645
UniProt: C5M2Y7
LinkDB
Position
Unknown
AA seq 1089 aa
MSPTEDNSNNKKKNLAGNYSIPDALNAELQKEFTKDVSTPMDKLKDDILNQNSYNKLRFQ
RAVNLNLDDQKSYKQIMNERNLEREEVRVDKLIKENQEIPQIGESESRKRKKRWDITPEE
YNKQKEQRLVTGSTSKLIEELARERLPVVNGIPLTDEILDKILPSGYSKVRQPPSFKQND
DTIPPDVIESNSSEYYVIPSNESIGVLQSGLPTEMSGIKGLDFFKEEDMKHFGKLASLNS
KTELSEIEKKEVGAMKLILKVKNGSPIVRKRAMKKLSSSVNNLGPKLLLNQILPVLMEPN
LDPQERHLLVRLVGRIIYQSNDLIRPYTHQVLSVISPFLIDEDPTIRLETKEIISSLTKA
AGLANIISTLRPDLDHVDEYVRNLTARIFAIVANTLGLKSFIPFLKAVIKSKKNWTARHT
GIKIIQQLCIMLGEGNGSTILPYLSTLVETLIPPINDEATQVRTITALTLAQLAENVSPY
GIDSFEPVLEPIWFGIRKQRGKGLASFLKCIGSIIPLMCYDPNYEEYTNYYTTEVTNIIV
REFESRDEDMRKTILNIIPRLPLSRKLIPGYETKVIVPFLKAFWNRRTATDSTRITKLVI
EATNHLAIKFDFLEMLEHIVYFSKDNNEELRRLAIEAINKLISNNKDELIGMDSQLDRKL
VDGVLYAFQNQTMQNKIYLTCFGTMANALNIRLKPHLNSILSTILYRMKNKLEYIREQAA
DLITIMAPYIKQCSEDEDELLIKLILILYESLGEVYPEVLGSIINALYGCLDAIDRVTLY
TMTNPSINQILPTLTPILKNRHEKVQEACINLVGLIARKNAETINAREWMRICFDLLEML
KAQRKRIRVAANRTFGYISQTIGPQDVIVMLLSNLRVQERQLRVCTAVAMGIVAETCLPF
TVLPAIMNEYRTPEKNVQNGVLKAMSFMFEYLDGKITKDYLFAITPLLEDALTDRDLVHR
QTAATVVFHIALNCIGLTNNDYTDVFIHFLNLIMPNIFETSPHVITRILESIESLRLVIG
NGIFTNYMWSGLFHPARKVRTPYWKIYNSAYVQCSDALVPYYPRIEELPNDDDTEQDLSY
KLEELDLYL
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgtcacctacagaggataatagtaataataagaagaaaaacctagcggggaattattcc
atacctgatgcgttgaatgcagaacttcagaaagaattcaccaaggatgtttctacacca
atggataaattgaaagatgatatattaaatcagaatagttataataaactaaggtttcaa
agagcagtcaatttaaacttggatgatcaaaaatcatataaacaaatcatgaatgaaagg
aatttagaacgtgaagaagttcgagtagacaagttgatcaaagaaaaccaagaaataccg
cagattggtgaaagtgaatcaaggaaaagaaagaaaagatgggatattactccagaagaa
tacaacaaacaaaaagaacaaagattagttactggatctacctcaaagttaattgaagaa
ttggctagagaaagattacctgtagtcaatgggataccattaactgatgagattttggac
aagatattaccactggggtatagtaaagttagacaacctccaagtttcaaacaaaacgac
gatactatccctccagatgtaatagaatcaaatagttctgaatattatgttatcccttca
aatgaatccattggagttttacaatcaggtctccccacagaaatgtctggaattaaagga
ttggattttttcaaggaagaagatatgaaacattttggtaaacttgcaagtcttaattcc
aagacagaattatctgaaattgaaaagaaagaagttggtgcaatgaaattaattttgaaa
gttaaaaatggatctcctattgttcgtaaacgtgctatgaagaaattatcaagtagtgta
aataaccttggtcctaaattattacttaaccaaattcttccagtgttaatggaaccaaat
ctagatcctcaggaaagacatttattagtcagattagttggaagaatcatttatcaactg
aatgatttgattcgtccatatacacatcaagtcttgtctgttatatcaccatttttaatt
gatgaagatccaacaataagattagaaactaaagaaatcatatcaagtttgactaaagct
gcaggtttagcaaatattatttctacattaagacccgatttagatcatgtggatgaatat
gttcgaaatttaacagcaagaatttttgctatagttgcaaacacattaggtttgaaatca
tttataccatttttgaaagcagtaattaaatcaaagaaaaattggacagctagacatact
ggaattaaaataattcaacaattatgtatcatgttgggagaagggaatggctctactata
ctaccttatctttctacattagttgaaacattaattccacctattaatgacgaagcaact
caagttagaaccatcactgctttaacattagctcaattagcagaaaatgtgtcaccatat
ggtattgactcctttgaaccagttttggaaccaatttggtttggtattagaaaacaaaga
ggtaaaggattggctagttttttgaaatgtattggttctattattccattgatgtgttat
gatccaaattatgaagaatatactaattattatactactgaggttacaaatattattgtt
cgagaatttgaatctcgagatgaagatatgaggaaaacaattcttaatatcatacctcga
ttaccattatcaaggaaacttatacctggttacgaaaccaaagttatagttccattcttg
aaagcattttggaatagacgtactgctactgattcaacaagaattacaaaattagtaatt
gaagcaacaaatcatttggcaattaagtttgattttttggaaatgttggaacatattgtt
tatttcagtaaggataacaatgaagaattgagacgattggctattgaagctatcaataaa
ttaatcagtaacaataaggatgaattgattggtatggattctcaattagatagaaaatta
gttgatggtgtattgtatgcgttccagaatcaaaccatgcaaaataagatttatttgaca
tgttttggaacaatggcaaatgcattaaacattagattaaaaccacatttgaattcaatt
ttaagtacaattttataccgaatgaagaataagttggaatatattagagaacaagcagct
gatttaattactattatggctccatatatcaaacaatgttctgaagatgaggatgaatta
ttaattaaattgattttaattttatatgaatcattaggagaagtttatcctgaagtttta
ggatcaattatcaatgcattatatggatgtcttgatgctatagatcgtgttacattatat
acaatgactaatccatcaatcaatcaaattttaccaactttgactcctattttaaaaaat
cgacatgaaaaagttcaagaagcatgtattaatttagttggattaatagctagaaagaat
gctgaaacgataaatgctagagaatggatgagaatttgttttgatttattagaaatgttg
aaagcacaacgtaaaagaataagagtagctgctaatcgtacatttggatatatttctcaa
actattggaccacaagatgttatagttatgcttttaagtaatttaagagtacaagaacgt
caattaagagtttgtactgctgttgctatgggtattgttgctgaaacatgtttaccattt
actgtattaccagcaattatgaatgaatatagaacacctgaaaaaaatgttcaaaatggt
gttttaaaagcaatgagttttatgtttgaatatttggatggtaaaattactaaagattat
ttatttgcaatcacaccattacttgaagatgcattaactgatagagatttagttcataga
caaacagcagcaacagttgttttccatattgctttgaattgtattggattaacaaataat
gattatactgatgtatttattcattttttgaatttaatcatgccaaatatttttgaaact
tctccacatgttattactagaattcttgaaagtattgaaagtttaagattagttattgga
aatggaattttcaccaattatatgtggtcaggtttatttcatcctgctagaaaagtaaga
acaccatattggaagatttataatagtgcttatgttcaatgcagtgatgcattagtccca
tattatccaagaatagaagaattaccaaatgatgatgatacagaacaagatttaagttat
aagttagaagaattagatttatatttatag

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