Candida tropicalis: CTRG_00823
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Entry
CTRG_00823 CDS
T01115
Name
(RefSeq) histone deacetylase RPD3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ctp
Candida tropicalis
Pathway
ctp03082
ATP-dependent chromatin remodeling
ctp03083
Polycomb repressive complex
ctp04213
Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CTRG_00823
03083 Polycomb repressive complex
CTRG_00823
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
CTRG_00823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctp03036
]
CTRG_00823
Enzymes [BR:
ctp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CTRG_00823
Chromosome and associated proteins [BR:
ctp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CTRG_00823
HDAC complexes
Sin3A-HDAC complex
CTRG_00823
BRAF-HDAC complex
CTRG_00823
REST complex
CTRG_00823
SHIP complex
CTRG_00823
MiDAC complex
CTRG_00823
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CTRG_00823
Heterochromatin formation proteins
Other heterochromatin formation proteins
CTRG_00823
Chromatin remodeling factors
NuRD complex
CTRG_00823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
8295922
NCBI-ProteinID:
XP_002546042
UniProt:
C5M434
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MYVELPFDEIKVNPIKKRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELDKKME
IYRAQPATNLEMTQFHTDEYIDFIDRVSPDNLHLFQREQVIFNVGDDCPVFDGLGEFCKI
SCGGSMEGAARLNNGSADIAINYAGGLHHAKKSEASGFCYTNDIVLAIIELLRYHPRVLY
IDIDVHHGDGVEEAFYTNDRVMTCSFHKYGEFFPGTGNLNDIGIGNGKYHSVNVPLRDGI
DDATYKSVFEPVISKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSFN
VPFMVVGGGGYTIRNVARTWAFETGICNGVILPKELPYNGYYEYYAPTYELDVRSSNMNN
ANSKEYLDKILTQLISNLDHTKHAPSVQMNEVPRDPEDWGDIEEDTPMAIDTKGGSQMAR
DKMIQGENEFYDDDEKDRGEKNIEENGKSNGNVNGNTNGILTDQEQAEISELNNES
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtggaacttccatttgatgagattaaagtaaatcccataaagaaaagagtagct
tatttctatgatcaagatgttgggaattatttctatggtacaggacattgtatgaaacca
catagaataagaatggctcattcattaattatgaattatgaattagataaaaaaatggaa
atttatcgagctcaaccagctactaatttagaaatgacacagtttcatactgatgaatat
attgattttattgatagagtttcacctgataatttacatctttttcaacgtgaacaagtt
atatttaatgttggtgatgattgtcctgtttttgatggattaggtgaattttgtaaaatt
tcatgtggtggatctatggaaggggcagcaaggttaaacaacggtctggctgatattgcc
attaattatgctggtggtttacatcatgctaagaaatcagaagcaagtggattttgttat
actaatgatattgtattggcaattattgagttattaagatatcatccaagagtattgtat
attgatattgatgttcatcatggtgatggggttgaagaagccttttatacaaatgacaga
gttatgacatgttcgtttcataaatatggtgaatttttccccggaactggtaatttgaat
gatattggtataggaaatgggaaatatcattctgtcaatgtcccattaagagatgggatt
gatgatgctacttataaatctgtatttgaacctgttattagtaaaatcatggaatggtat
caaccatctgctattgttttacaatgtggtggtgattcattaagtggtgatagattaggt
ccatttaatttatctatgagaggtcatgccaactgtgtcaattttgttagatcattcaat
gttccattcatggttgttggtggtggtggatataccattagaaatgttgctcgtacatgg
gcatttgaaactggtatttgtaatggggtgatattacctaaagaattaccatataatgga
tattatgaatattatgccccaacttatgaattagatgttcgatcgtcaaatatgaataac
gcaaattcaaaagaatatctagataaaatacttacacaattgatttccaatcttgatcat
actaaacatgccccatcggtacagatgaatgaagtcccacgtgatcccgaagattggggt
gatattgaagaagatacaccaatggcaatagatacaaaaggtggatcacaaatggctaga
gataaaatgatacaaggtgagaatgaattttatgacgatgatgagaaagaccgcggtgaa
aaaaatattgaagaaaatgggaagtccaatggaaatgtaaatgggaatactaatggaata
ttaacagatcaagaacaagccgaaatatctgaattaaataacgagtcctga
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