Candida tropicalis: CTRG_00923
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Entry
CTRG_00923 CDS
T01115
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ctp
Candida tropicalis
Pathway
ctp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CTRG_00923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctp03041
]
CTRG_00923
03009 Ribosome biogenesis [BR:
ctp03009
]
CTRG_00923
Enzymes [BR:
ctp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CTRG_00923
Spliceosome [BR:
ctp03041
]
Complex A
U1 snRNP components
U1 related factors
CTRG_00923
Complex B
CTRG_00923
Ribosome biogenesis [BR:
ctp03009
]
Eukaryotic type
Pre-60S particles
Helicases
CTRG_00923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
8301884
NCBI-ProteinID:
XP_002546141
UniProt:
C5M4D3
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MSYNNGGYRNDRGGYNNGGYGGRDQGGYGGGRGYGGGNRDGGFGGRGGGRGGYNDRGFGG
GRGGRFNDAPRQELTAPQWDLESLPKFEKNFYTEHPNVASRSDREIDQFRRENEMTIEGR
DIPHPITSFDEAGFPDYVLSELKELGFPKPTAIQCQGWPMALSGRDMVGIAATGSGKTLS
YCLPSIVHINAQPELQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPK
GPQIRDLNKGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVD
QIRPDRQTLMWSATWPKEVERLANDYLQDPIKVTIGSLELAASHTITQLVEVIDEFSKRD
RLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKDQSERDWVLNEF
RQGKTSIMVATDVAARGIGMYYFFFVHEESFFIYSLELTNCLTC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcatataataacggtggatacagaaacgatagaggtggctacaataatggtggctac
ggtggtagagaccaaggtggctatggcggaggccgtggttacggtggtggtaacagagat
ggtggttttggtggccgtggtggcggcagaggtggttacaatgatagaggatttggtggt
ggccgtggtggtagatttaacgatgccccaagacaagaattaactgctccacaatgggat
ttggaatccttaccaaaatttgaaaagaatttctataccgaacatccaaatgttgccagt
agatctgatagagaaattgatcaatttagaagagaaaatgaaatgactattgaaggtaga
gatatcccacatccaattaccagtttcgatgaagctggtttcccagattatgttttgagt
gaattgaaagaattgggtttcccaaaaccaactgctattcaatgtcaaggttggccaatg
gctttaagtggtagagatatggttggtattgctgctactggttctggtaagaccttgtct
tattgtttaccatccattgttcatatcaatgctcaaccagaattacaatatggagatggt
ccaatcgttttggttttggctccaaccagagaattggctgttcaaattcaaactgaatgt
tctaaatttggtaaatcttctagaatcagaaacacttgtgtttatggtggtgctccaaaa
ggtccacaaatcagagacttgaataaaggtgttgaaatctgtattgctaccccaggtaga
ttgattgatatgttggaagctggtaagaccaacttgaagagagttacttatttggtttta
gatgaagctgatcgtatgttggatatgggttttgaaccacaaatcagaaaaattgttgat
caaattagaccagatcgtcaaactttgatgtggtctgctacttggccaaaagaagttgaa
agattagctaatgattacttgcaagatccaatcaaggttactattggttctttggaattg
gctgcttctcacaccattactcaattggttgaagttattgatgaattttccaagagagac
agacttgtcaaacacttggaatctgcattgaatgaaaaggataacaagattttggttttc
gcttctactaagagaacctgtgatgaaatcactacttatttaagatcagatggttggcca
gctttagctatccatggtgacaaagaccaaagtgaaagagactgggttttgaatgaattc
agacaaggtaaaacttctattatggttgcaacagatgttgctgctagaggtattggtatg
tattattttttttttgttcatgaagaatctttttttatttattctttagaacttactaac
tgtttaacttgttga
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