Candida tropicalis: CTRG_00925
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Entry
CTRG_00925 CDS
T01115
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
ctp
Candida tropicalis
Pathway
ctp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTRG_00925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_00925
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CTRG_00925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
8297262
NCBI-ProteinID:
XP_002546143
UniProt:
C5M4D5
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MSDRRRILGPLGMIHPNIPHTQPSTASTTKSSSSIPSFFLKHSVITNANGSAYLEINNTI
IEVSIFGPRPIRGSFIDRATLSIECKFLPHISPQPQSNIFNDGSKNIRTGMTNVEHKLSN
YLESCFLPCLVLEKYPKSTIDIQVSIISVDKEMLNDDDGRTNNDNSSLLWLCQWMVCCCS
LALVDSGIEMRDIVSSGQVRYTKSGKVLINPIGNTTNEKEEDDEEEGVDALVSFMNLKND
EIVGIWFESNDDEKVPLDESQMEKLIEECNKMSKIVRANINSYLINSV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagaagaagaattttaggacctttaggaatgatccatccaaacattcctcat
acccaaccatctactgcttctactactaaatcatcatcatcaattccatcatttttcctt
aaacattcagtaataacaaatgcaaatggatcagcatatttagaaattaataatactata
attgaagtatctatatttggaccaagaccaattagaggttcatttatagatagagcaaca
ttatcaattgaatgtaaatttcttcctcatatttcaccacaacctcaatcaaatattttt
aatgatggttcaaaaaatattagaactggtatgactaatgttgaacataaattaagtaat
tatttagaaagttgttttttaccttgtttagtattggaaaaatatccaaaatcaactata
gacattcaagtttctattattagtgttgataaagaaatgttaaatgatgatgatggaaga
acaaataatgataattcaagtttattatggttatgtcaatggatggtatgttgttgtagt
ttagctttggttgattcaggaattgaaatgagagatattgtaagtagtggtcaagttaga
tatactaaatcaggtaaagttttaattaacccaattggaaatactaccaatgaaaaagaa
gaagatgatgaagaagaaggtgttgatgcattggttagttttatgaatttgaagaatgat
gaaattgttggaatttggtttgaaagtaatgatgatgaaaaagttccattggatgaatca
caaatggaaaaattaattgaagaatgtaataaaatgtcaaagattgtaagagctaatatt
aattcctatttgattaattcagtctag
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